changeset 1:cf875cbe2df4 draft

Uploaded updated data manager that specifies samtools 0.1.19.
author devteam
date Thu, 27 Mar 2014 15:08:42 -0400
parents d6b6db69d9bf
children 2a1ac1abc3f7
files data_manager/data_manager_sam_fasta_index_builder.xml tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/data_manager_sam_fasta_index_builder.xml	Thu Mar 27 14:15:02 2014 -0400
+++ b/data_manager/data_manager_sam_fasta_index_builder.xml	Thu Mar 27 15:08:42 2014 -0400
@@ -1,7 +1,7 @@
-<tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.1">
+<tool id="sam_fasta_index_builder" name="SAM FASTA index" tool_type="manage_data" version="0.0.2">
     <description>builder</description>
     <requirements>
-        <requirement type="package" version="0.1.18">samtools</requirement>
+        <requirement type="package" version="0.1.19">samtools</requirement>
     </requirements>
     <command interpreter="python">data_manager_sam_fasta_index_builder.py "${out_file}" --fasta_filename "${all_fasta_source.fields.path}" --fasta_dbkey "${all_fasta_source.fields.dbkey}" --fasta_description "${all_fasta_source.fields.name}" --data_table_name "fasta_indexes"</command>
     <inputs>
--- a/tool_dependencies.xml	Thu Mar 27 14:15:02 2014 -0400
+++ b/tool_dependencies.xml	Thu Mar 27 15:08:42 2014 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="samtools" version="0.1.18">
-        <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+    <package name="samtools" version="0.1.19">
+        <repository changeset_revision="1ef76f8d8e52" name="package_samtools_0_1_19" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>