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diff test-data/lastz_diffs.txt @ 0:0801f8207d30 draft

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author devteam
date Mon, 26 Nov 2012 09:47:51 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/lastz_diffs.txt	Mon Nov 26 09:47:51 2012 -0500
@@ -0,0 +1,19 @@
+phiX	2490	2491	+	5386	HWI-EAS91_1_306UPAAXX:6:1:486:822	10	11	-	36	C	A	ACCTGTTTTACAGACACCTAAAGCTACATCGTCAAC	ACCTGTTTTAAAGACACCTAAAGCTACATCGTCAAC
+phiX	2173	2174	+	5386	HWI-EAS91_1_306UPAAXX:6:1:259:1389	26	27	+	36	G	T	GCGTACTTATTCGCCACCATGATTATGACCAGTGTT	GCGTACTTATTCGCCACCATGATTATTACCAGTGTT
+phiX	578	579	+	5386	HWI-EAS91_1_306UPAAXX:6:1:317:1411	8	9	+	36	G	T	GTACGCTGGACTTTGTGGGATACCCTCGCTTTCCT	GTACGCTGTACTTTGTGGGATACCCTCGCTTTCCT
+phiX	2992	2993	+	5386	HWI-EAS91_1_306UPAAXX:6:1:458:1629	23	24	+	36	G	T	GCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGT	GCTGGTGGCGCCATGTCTAAATTTTTTGGAGGCGGT
+phiX	4783	4784	+	5386	HWI-EAS91_1_306UPAAXX:6:1:646:59	18	19	-	36	C	T	CATTTCCATGCGGTGCACTTTATGCGGACACTTCC	CATTTCCATGCGGTGCATTTTATGCGGACACTTCC
+phiX	1649	1650	+	5386	HWI-EAS91_1_306UPAAXX:6:1:295:694	24	25	+	36	A	G	GTGATTACTTCATGCAGCGTTACCATGATGTTATTT	GTGATTACTTCATGCAGCGTTACCGTGATGTTATTT
+phiX	1995	1996	+	5386	HWI-EAS91_1_306UPAAXX:6:1:590:331	14	15	+	36	G	T	GAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGAT	GAAATTTCTATGAATGATGTTTTCCGTTCTGGTGAT
+phiX	3261	3262	+	5386	HWI-EAS91_1_306UPAAXX:6:1:221:1238	17	18	-	36	C	A	AAGTCTGCCGCTGATAAAGGAAAGGATAC	AAGTCTGCCGATGATAAAGGAAAGGATAC
+phiX	4109	4110	+	5386	HWI-EAS91_1_306UPAAXX:6:1:478:252	12	13	-	36	C	A	ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC	ATGCTTGGCTTCAATAAGCAGATGGATAACCGCATC
+phiX	2972	2973	+	5386	HWI-EAS91_1_306UPAAXX:6:1:836:1204	17	18	+	36	G	T	TTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAAT	TTGCTTCTGCTCTTGCTTGTGGCGCCATGTCTAAAT
+phiX	2234	2235	+	5386	HWI-EAS91_1_306UPAAXX:6:1:172:1412	13	14	-	36	C	A	AAATTTAATGTGACCGTTTATCGCAATCTGCCGACC	AAATTTAATGTGAACGTTTATCGCAATCTGCCGACC
+phiX	2902	2903	+	5386	HWI-EAS91_1_306UPAAXX:6:1:540:1415	18	19	+	36	G	T	TTATTAAAGAGATTATTTGTCTCCAGCCACTTA	TTATTAAAGAGATTATTTTTCTCCAGCCACTTA
+phiX	2837	2838	+	5386	HWI-EAS91_1_306UPAAXX:6:1:253:1162	14	15	-	36	T	A	ATGGTTTGGTCTAACTTTACCGCTACTAAATGC	ATGGTTTGGTCAAACTTTACCGCTACTAAATGC
+phiX	4662	4663	+	5386	HWI-EAS91_1_306UPAAXX:6:1:828:754	26	27	+	36	G	T	TTTGCGTGACTATTTTCGTGATATTGGTCGTATGGT	TTTGCGTGACTATTTTCGTGATATTGTTCGTATGGT
+phiX	4783	4784	+	5386	HWI-EAS91_1_306UPAAXX:6:1:1566:499	9	10	+	36	C	T	TGCGGTGCACTTTATGCGGACACTTCCTACAGGTAG	TGCGGTGCATTTTATGCGGACACTTCCTACAGGTAG
+phiX	2857	2858	+	5386	HWI-EAS91_1_306UPAAXX:6:1:578:971	15	16	+	36	G	T	CGCTACTAAATGCCGCGGATTGGTTTCG	CGCTACTAAATTCCGCGGATTGGTTTCG
+phiX	3112	3113	+	5386	HWI-EAS91_1_306UPAAXX:6:1:1721:1800	27	28	-	36	T	C	TCAAGGCTCTAATGTTCCTAACCC	TCAAGGCTCTAATGTCCCTAACCC
+phiX	4825	4826	+	5386	HWI-EAS91_1_306UPAAXX:6:1:815:1640	9	10	-	36	T	G	CCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA	CCCTAATTTGGGTCGTCGGGTACGCAATCGCCGCCA
+phiX	4517	4518	+	5386	HWI-EAS91_1_306UPAAXX:6:1:1485:741	19	20	-	36	G	A	GAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGAT	GAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGAT