diff test-data/peakcalling_macs/macs_test_2_peaks_out.interval @ 0:ae2ec275332a draft

Imported from capsule None

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peakcalling_macs/macs_test_2_peaks_out.interval	Mon Jan 27 09:28:45 2014 -0500
@@ -0,0 +1,1289 @@
+#peaks file
+# This file is generated by MACS
+# ARGUMENTS LIST:
+# name = Galaxy_Test_Run
+# format = BED
+# ChIP-seq file = /galaxy/home/dan/central/database/files/000/dataset_404.dat
+# control file = /galaxy/home/dan/central/database/files/000/dataset_405.dat
+# effective genome size = 2.70e+09
+# tag size = 36
+# band width = 300
+# model fold = 13
+# pvalue cutoff = 1.00e-05
+# Ranges for calculating regional lambda are : peak_region,1000,5000,10000
+# unique tags in treatment: 9898
+# total tags in treatment: 10000
+# unique tags in control: 9896
+# total tags in control: 10000
+# d = 113
+#chr	start	end	length	summit	tags	-10*log10(pvalue)	fold_enrichment	FDR(%)
+chr1	3138857	3139271	414	95	6	53.08	35.39	3.55
+chr1	4133899	4134700	801	157	27	51.91	9.92	3.70
+chr1	4323670	4324367	697	306	49	272.01	29.81	0.00
+chr1	4336486	4337946	1460	1216	65	228.35	32.00	0.00
+chr1	4407086	4409120	2034	1133	105	300.46	29.27	0.00
+chr1	4507832	4508710	878	245	44	161.74	18.90	0.00
+chr1	4657704	4658572	868	775	9	280.37	7242.01	0.00
+chr1	4658705	4659021	316	110	4	131.25	4828.01	0.00
+chr1	4659147	4660581	1434	844	15	463.08	7242.01	0.00
+chr1	4661156	4661317	161	81	4	174.88	9656.01	0.00
+chr1	4661505	4661617	112	57	2	100.24	4828.01	0.17
+chr1	4661790	4662463	673	287	7	219.58	4828.01	0.00
+chr1	4662710	4663434	724	623	12	395.94	9656.01	0.00
+chr1	4664135	4664430	295	64	5	169.10	7242.01	0.00
+chr1	4665001	4665113	112	57	2	100.24	4828.01	0.17
+chr1	4665839	4666425	586	475	10	332.40	12070.02	0.00
+chr1	4666581	4666693	112	57	2	100.24	4828.01	0.17
+chr1	4666840	4666981	141	71	4	174.88	9656.01	0.00
+chr1	4667600	4667712	112	57	2	100.24	4828.01	0.17
+chr1	4668711	4669005	294	75	5	169.17	7242.01	0.00
+chr1	4669126	4669238	112	57	2	100.24	4828.01	0.17
+chr1	4669537	4669752	215	108	5	174.88	12070.02	0.00
+chr1	4669936	4670048	112	57	2	100.24	4828.01	0.17
+chr1	4670216	4670449	233	97	6	212.68	12070.02	0.00
+chr1	4673856	4674051	195	98	4	137.07	9656.01	0.00
+chr1	4674349	4674478	129	65	3	137.07	7242.01	0.00
+chr1	4675027	4675152	125	63	3	137.07	7242.01	0.00
+chr1	4676227	4676339	112	57	2	100.24	4828.01	0.17
+chr1	4676511	4676623	112	57	2	100.24	4828.01	0.17
+chr1	4676954	4677151	197	99	3	100.24	7242.01	0.17
+chr1	4677646	4677758	112	57	2	100.24	4828.01	0.17
+chr1	4678360	4678472	112	57	2	100.24	4828.01	0.17
+chr1	4678659	4679136	477	307	7	230.04	7242.01	0.00
+chr1	4679439	4679551	112	57	2	100.24	4828.01	0.17
+chr1	4680106	4680523	417	103	5	126.43	4828.01	0.00
+chr1	4680822	4680934	112	57	2	100.24	4828.01	0.17
+chr1	4681075	4682050	975	104	8	241.81	4828.01	0.00
+chr1	4682229	4682387	158	80	3	100.24	7242.01	0.17
+chr1	4682594	4682706	112	57	2	100.24	4828.01	0.17
+chr1	4683158	4683270	112	57	2	100.24	4828.01	0.17
+chr1	4683473	4683585	112	57	2	100.24	4828.01	0.17
+chr1	4683832	4683944	112	57	2	100.24	4828.01	0.17
+chr1	4684591	4684775	184	93	3	100.24	7242.01	0.17
+chr1	4685292	4685404	112	57	2	100.24	4828.01	0.17
+chr1	4685810	4686198	388	75	4	127.69	4828.01	0.00
+chr1	4686493	4686605	112	57	2	100.24	4828.01	0.17
+chr1	4686818	4686930	112	57	2	100.24	4828.01	0.17
+chr1	4687387	4687499	112	57	2	100.24	4828.01	0.17
+chr1	4687692	4687902	210	106	5	174.88	12070.02	0.00
+chr1	4688181	4688790	609	96	8	258.16	9656.01	0.00
+chr1	4689101	4689557	456	250	7	231.41	9656.01	0.00
+chr1	4690039	4690151	112	57	2	100.24	4828.01	0.17
+chr1	4690290	4690402	112	57	2	100.24	4828.01	0.17
+chr1	4690780	4690907	127	64	3	137.07	7242.01	0.00
+chr1	4691478	4692335	857	509	10	315.89	7242.01	0.00
+chr1	4692464	4692768	304	67	4	131.92	7242.01	0.00
+chr1	4693243	4693751	508	307	7	228.13	9656.01	0.00
+chr1	4694306	4694418	112	57	2	100.24	4828.01	0.17
+chr1	4694738	4695016	278	75	5	170.38	9656.01	0.00
+chr1	4695207	4695378	171	86	3	100.24	7242.01	0.17
+chr1	4695503	4696600	1097	535	12	374.29	7242.01	0.00
+chr1	4696903	4697015	112	57	2	100.24	4828.01	0.17
+chr1	4697569	4697912	343	106	7	240.07	12070.02	0.00
+chr1	4698224	4698395	171	86	3	100.24	7242.01	0.17
+chr1	4698790	4698904	114	58	3	137.07	7242.01	0.00
+chr1	4699223	4699430	207	104	4	137.07	9656.01	0.00
+chr1	4699642	4699754	112	57	2	100.24	4828.01	0.17
+chr1	4700457	4700569	112	57	2	100.24	4828.01	0.17
+chr1	4700853	4700965	112	57	2	100.24	4828.01	0.17
+chr1	4708474	4708898	424	57	4	126.15	4828.01	0.00
+chr1	4709426	4709741	315	102	5	167.67	9656.01	0.00
+chr1	4709925	4710127	202	102	4	137.07	9656.01	0.00
+chr1	4710465	4710577	112	57	2	100.24	4828.01	0.17
+chr1	4710812	4711277	465	111	6	194.68	7242.01	0.00
+chr1	4711462	4711762	300	102	4	132.15	4828.01	0.00
+chr1	4712202	4712479	277	57	3	97.58	4828.01	0.24
+chr1	4712673	4713163	490	111	10	340.17	9656.01	0.00
+chr1	4713659	4714656	997	230	13	414.78	7242.01	0.00
+chr1	4714840	4715470	630	83	7	221.59	7242.01	0.00
+chr1	4715671	4715783	112	57	2	100.24	4828.01	0.17
+chr1	4715908	4716811	903	824	16	530.04	12070.02	0.00
+chr1	4717318	4717430	112	57	2	100.24	4828.01	0.17
+chr1	4717789	4718230	441	103	7	232.43	12070.02	0.00
+chr1	4718990	4719236	246	57	3	99.13	4828.01	0.16
+chr1	4719718	4719830	112	57	2	100.24	4828.01	0.17
+chr1	4720276	4720388	112	57	2	100.24	4828.01	0.17
+chr1	4721061	4721173	112	57	2	100.24	4828.01	0.17
+chr1	4721620	4721782	162	82	3	100.24	7242.01	0.17
+chr1	4722229	4722341	112	57	2	100.24	4828.01	0.17
+chr1	4723262	4723374	112	57	2	100.24	4828.01	0.17
+chr1	4724496	4724608	112	57	2	100.24	4828.01	0.17
+chr1	4726179	4726291	112	57	2	100.24	4828.01	0.17
+chr1	4726472	4727091	619	82	6	187.23	7242.01	0.00
+chr1	4727268	4727705	437	66	6	196.30	7242.01	0.00
+chr1	4727871	4727983	112	57	2	100.24	4828.01	0.17
+chr1	4728976	4729088	112	57	2	100.24	4828.01	0.17
+chr1	4729473	4729611	138	70	3	137.07	7242.01	0.00
+chr1	4729954	4730093	139	70	3	137.07	7242.01	0.00
+chr1	4730636	4730805	169	85	3	100.24	7242.01	0.17
+chr1	4730936	4731305	369	111	5	164.24	9656.01	0.00
+chr1	4731799	4732585	786	443	11	355.47	7242.01	0.00
+chr1	4733192	4733304	112	57	2	100.24	4828.01	0.17
+chr1	4733710	4733831	121	61	3	137.07	7242.01	0.00
+chr1	4734062	4734891	829	75	11	352.92	9656.01	0.00
+chr1	4735075	4735290	215	108	4	137.07	9656.01	0.00
+chr1	4735523	4736190	667	236	7	185.28	4828.01	0.00
+chr1	4736399	4737184	785	80	11	355.53	9656.01	0.00
+chr1	4737395	4737601	206	104	4	137.07	9656.01	0.00
+chr1	4737973	4738425	452	188	7	231.68	7242.01	0.00
+chr1	4738796	4739212	416	311	6	197.58	7242.01	0.00
+chr1	4739379	4739491	112	57	2	100.24	4828.01	0.17
+chr1	4739612	4740720	1108	105	18	588.51	9656.01	0.00
+chr1	4741405	4741655	250	80	4	135.32	7242.01	0.00
+chr1	4741998	4742300	302	79	4	132.04	4828.01	0.00
+chr1	4742829	4742952	123	62	3	137.07	7242.01	0.00
+chr1	4743079	4743327	248	101	4	135.46	4828.01	0.00
+chr1	4743612	4744566	954	97	14	453.30	12070.02	0.00
+chr1	4744719	4745224	505	260	8	264.66	7242.01	0.00
+chr1	4745398	4745786	388	301	8	236.32	9656.01	0.00
+chr1	4746034	4746316	282	112	5	170.07	9656.01	0.00
+chr1	4747206	4748408	1202	316	15	474.57	9656.01	0.00
+chr1	4748814	4748926	112	57	2	100.24	4828.01	0.17
+chr1	4749222	4749334	112	57	2	100.24	4828.01	0.17
+chr1	4749686	4750054	368	97	8	275.66	12070.02	0.00
+chr1	4750335	4750697	362	79	5	164.65	7242.01	0.00
+chr1	4750863	4751682	819	109	8	247.87	4828.01	0.00
+chr1	4751853	4752428	575	78	6	189.15	7242.01	0.00
+chr1	4752581	4753611	1030	565	13	412.95	9656.01	0.00
+chr1	4754241	4754864	623	233	10	329.74	9656.01	0.00
+chr1	4755088	4755200	112	57	2	100.24	4828.01	0.17
+chr1	4755722	4756029	307	100	6	205.50	12070.02	0.00
+chr1	4756768	4756880	112	57	2	100.24	4828.01	0.17
+chr1	4757199	4758615	1416	753	18	569.34	7242.01	0.00
+chr1	4758753	4762214	3461	1125	247	3100.00	217260.30	0.00
+chr1	4763207	4763319	112	57	2	100.24	4828.01	0.17
+chr1	4763614	4763726	112	57	2	100.24	4828.01	0.17
+chr1	4763998	4764322	324	233	10	358.13	14484.02	0.00
+chr1	4764568	4764850	282	62	4	133.23	7242.01	0.00
+chr1	4765104	4765765	661	112	9	291.01	12070.02	0.00
+chr1	4765892	4766067	175	88	3	100.24	7242.01	0.17
+chr1	4766232	4766420	188	95	3	100.24	7242.01	0.17
+chr1	4766539	4767148	609	171	11	367.65	14484.02	0.00
+chr1	4767417	4767529	112	57	2	100.24	4828.01	0.17
+chr1	4768245	4768357	112	57	2	100.24	4828.01	0.17
+chr1	4768587	4768870	283	99	5	170.00	9656.01	0.00
+chr1	4768989	4769272	283	104	4	133.17	4828.01	0.00
+chr1	4769463	4769684	221	111	5	174.88	12070.02	0.00
+chr1	4769861	4770236	375	287	6	200.29	7242.01	0.00
+chr1	4770689	4771270	581	256	7	224.05	7242.01	0.00
+chr1	4771393	4772502	1109	197	49	1799.39	57936.08	0.00
+chr1	4772633	4772916	283	95	4	133.17	7242.01	0.00
+chr1	4773121	4773284	163	82	3	100.24	7242.01	0.17
+chr1	4773476	4773614	138	70	3	137.07	7242.01	0.00
+chr1	4773827	4774279	452	84	5	159.83	7242.01	0.00
+chr1	4774510	4774622	112	57	2	100.24	4828.01	0.17
+chr1	4775041	4775694	653	100	9	291.49	12070.02	0.00
+chr1	4775832	4775944	112	57	2	100.24	4828.01	0.17
+chr1	4776166	4776310	144	73	3	137.07	7242.01	0.00
+chr1	4776506	4776851	345	276	5	165.70	7242.01	0.00
+chr1	4777100	4777321	221	111	4	137.07	9656.01	0.00
+chr1	4777505	4777617	112	57	2	100.24	4828.01	0.17
+chr1	4777764	4778298	534	84	5	156.21	4828.01	0.00
+chr1	4778680	4778792	112	57	2	100.24	4828.01	0.17
+chr1	4779265	4779377	112	57	2	100.24	4828.01	0.17
+chr1	4780814	4780926	112	57	2	100.24	4828.01	0.17
+chr1	4781238	4781436	198	100	4	137.07	9656.01	0.00
+chr1	4781600	4781712	112	57	2	100.24	4828.01	0.17
+chr1	4784249	4784487	238	164	5	173.76	7242.01	0.00
+chr1	4784800	4784912	112	57	2	100.24	4828.01	0.17
+chr1	4785500	4785612	112	57	2	100.24	4828.01	0.17
+chr1	4786820	4787357	537	358	7	226.44	4828.01	0.00
+chr1	4787570	4787682	112	57	2	100.24	4828.01	0.17
+chr1	4789440	4789978	538	100	8	262.47	7242.01	0.00
+chr1	4790257	4790424	167	84	3	100.24	7242.01	0.17
+chr1	4790723	4791308	585	104	7	223.84	12070.02	0.00
+chr1	4791871	4792641	770	664	12	392.73	14484.02	0.00
+chr1	4792756	4793323	567	109	6	189.52	7242.01	0.00
+chr1	4794493	4794929	436	254	7	232.77	9656.01	0.00
+chr1	4795046	4795357	311	89	4	131.53	4828.01	0.00
+chr1	4795495	4795607	112	57	2	100.24	4828.01	0.17
+chr1	4796218	4796432	214	108	5	174.88	12070.02	0.00
+chr1	4796841	4796953	112	57	2	100.24	4828.01	0.17
+chr1	4797267	4797499	232	57	3	99.89	4828.01	0.17
+chr1	4797910	4798022	112	57	2	100.24	4828.01	0.17
+chr1	4799151	4799263	112	57	2	100.24	4828.01	0.17
+chr1	4799518	4800266	748	108	8	216.37	7242.01	0.00
+chr1	4800415	4800527	112	57	2	100.24	4828.01	0.17
+chr1	4800989	4801101	112	57	2	100.24	4828.01	0.17
+chr1	4801344	4802288	944	474	10	311.70	7242.01	0.00
+chr1	4802600	4802712	112	57	2	100.24	4828.01	0.17
+chr1	4802944	4803056	112	57	2	100.24	4828.01	0.17
+chr1	4803408	4803520	112	57	2	100.24	4828.01	0.17
+chr1	4803899	4804011	112	57	2	100.24	4828.01	0.17
+chr1	4804278	4804390	112	57	2	100.24	4828.01	0.17
+chr1	4804716	4805427	711	63	11	360.26	9656.01	0.00
+chr1	4805843	4806018	175	88	3	100.24	7242.01	0.17
+chr1	4806294	4806406	112	57	2	100.24	4828.01	0.17
+chr1	4806523	4806849	326	112	7	241.61	12070.02	0.00
+chr1	4807024	4807205	181	91	5	174.88	12070.02	0.00
+chr1	4807520	4807740	220	111	3	100.24	7242.01	0.17
+chr1	4808021	4808133	112	57	2	100.24	4828.01	0.17
+chr1	4809641	4810406	765	505	10	320.82	7242.01	0.00
+chr1	4810853	4812088	1235	751	16	508.29	9656.01	0.00
+chr1	4812253	4812665	412	110	7	234.49	12070.02	0.00
+chr1	4813090	4813202	112	57	2	100.24	4828.01	0.17
+chr1	4813466	4813836	370	95	6	200.64	9656.01	0.00
+chr1	4814068	4814180	112	57	2	100.24	4828.01	0.17
+chr1	4814343	4814700	357	100	4	129.13	4828.01	0.00
+chr1	4814902	4815014	112	57	2	100.24	4828.01	0.17
+chr1	4815190	4815343	153	77	4	174.88	9656.01	0.00
+chr1	4815570	4816098	528	111	6	191.37	7242.01	0.00
+chr1	4816683	4817303	620	65	7	222.07	7242.01	0.00
+chr1	4817449	4817735	286	57	3	97.17	4828.01	0.24
+chr1	4818299	4818411	112	57	2	100.24	4828.01	0.17
+chr1	4819699	4819870	171	86	4	137.07	9656.01	0.00
+chr1	4820406	4821178	772	269	13	429.22	9656.01	0.00
+chr1	4821318	4821821	503	94	6	192.64	9656.01	0.00
+chr1	4822130	4822242	112	57	2	100.24	4828.01	0.17
+chr1	4822509	4823010	501	83	6	192.74	7242.01	0.00
+chr1	4823526	4823638	112	57	2	100.24	4828.01	0.17
+chr1	4823838	4823996	158	80	4	174.88	9656.01	0.00
+chr1	4824146	4824258	112	57	2	100.24	4828.01	0.17
+chr1	4824694	4824806	112	57	2	100.24	4828.01	0.17
+chr1	4825207	4825319	112	57	2	100.24	4828.01	0.17
+chr1	4825494	4825606	112	57	2	100.24	4828.01	0.17
+chr1	4825793	4825905	112	57	2	100.24	4828.01	0.17
+chr1	4827008	4827120	112	57	2	100.24	4828.01	0.17
+chr1	4827550	4827866	316	57	3	95.87	4828.01	0.24
+chr1	4828619	4829306	687	57	6	184.51	4828.01	0.00
+chr1	4829921	4830483	562	132	12	409.14	14484.02	0.00
+chr1	4830656	4830878	222	112	4	137.07	9656.01	0.00
+chr1	4831394	4831506	112	57	2	100.24	4828.01	0.17
+chr1	4831844	4831956	112	57	2	100.24	4828.01	0.17
+chr1	4832109	4832299	190	96	4	137.07	9656.01	0.00
+chr1	4832653	4832765	112	57	2	100.24	4828.01	0.17
+chr1	4833194	4833306	112	57	2	100.24	4828.01	0.17
+chr1	4833562	4834290	728	106	10	322.98	7242.01	0.00
+chr1	4834418	4834761	343	57	4	129.83	4828.01	0.00
+chr1	4835007	4835561	554	275	8	225.49	9656.01	0.00
+chr1	4835772	4835884	112	57	2	100.24	4828.01	0.17
+chr1	4836111	4836342	231	74	4	136.69	7242.01	0.00
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+chr1	5729591	5729703	112	57	2	100.24	4828.01	0.17
+chr1	5729971	5730118	147	74	3	137.07	7242.01	0.00
+chr1	5735097	5735209	112	57	2	100.24	4828.01	0.17
+chr1	5738165	5738277	112	57	2	100.24	4828.01	0.17
+chr1	5741886	5742013	127	64	3	137.07	7242.01	0.00
+chr1	5742222	5742493	271	85	4	133.92	7242.01	0.00
+chr1	5742624	5742892	268	57	3	98.02	4828.01	0.16
+chr1	5743479	5743591	112	57	2	100.24	4828.01	0.17
+chr1	5743802	5743943	141	71	3	137.07	7242.01	0.00
+chr1	5744327	5745001	674	99	6	185.01	4828.01	0.00
+chr1	5745544	5746174	630	291	7	221.59	4828.01	0.00
+chr1	5746482	5747182	700	89	7	218.38	9656.01	0.00
+chr1	5747751	5747863	112	57	2	100.24	4828.01	0.17
+chr1	5749480	5749592	112	57	2	100.24	4828.01	0.17