Mercurial > repos > devteam > macs
view test-data/peakcalling_macs/macs_test_2_peaks_out.interval @ 0:ae2ec275332a draft
Imported from capsule None
| author | devteam |
|---|---|
| date | Mon, 27 Jan 2014 09:28:45 -0500 |
| parents | |
| children |
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#peaks file # This file is generated by MACS # ARGUMENTS LIST: # name = Galaxy_Test_Run # format = BED # ChIP-seq file = /galaxy/home/dan/central/database/files/000/dataset_404.dat # control file = /galaxy/home/dan/central/database/files/000/dataset_405.dat # effective genome size = 2.70e+09 # tag size = 36 # band width = 300 # model fold = 13 # pvalue cutoff = 1.00e-05 # Ranges for calculating regional lambda are : peak_region,1000,5000,10000 # unique tags in treatment: 9898 # total tags in treatment: 10000 # unique tags in control: 9896 # total tags in control: 10000 # d = 113 #chr start end length summit tags -10*log10(pvalue) fold_enrichment FDR(%) chr1 3138857 3139271 414 95 6 53.08 35.39 3.55 chr1 4133899 4134700 801 157 27 51.91 9.92 3.70 chr1 4323670 4324367 697 306 49 272.01 29.81 0.00 chr1 4336486 4337946 1460 1216 65 228.35 32.00 0.00 chr1 4407086 4409120 2034 1133 105 300.46 29.27 0.00 chr1 4507832 4508710 878 245 44 161.74 18.90 0.00 chr1 4657704 4658572 868 775 9 280.37 7242.01 0.00 chr1 4658705 4659021 316 110 4 131.25 4828.01 0.00 chr1 4659147 4660581 1434 844 15 463.08 7242.01 0.00 chr1 4661156 4661317 161 81 4 174.88 9656.01 0.00 chr1 4661505 4661617 112 57 2 100.24 4828.01 0.17 chr1 4661790 4662463 673 287 7 219.58 4828.01 0.00 chr1 4662710 4663434 724 623 12 395.94 9656.01 0.00 chr1 4664135 4664430 295 64 5 169.10 7242.01 0.00 chr1 4665001 4665113 112 57 2 100.24 4828.01 0.17 chr1 4665839 4666425 586 475 10 332.40 12070.02 0.00 chr1 4666581 4666693 112 57 2 100.24 4828.01 0.17 chr1 4666840 4666981 141 71 4 174.88 9656.01 0.00 chr1 4667600 4667712 112 57 2 100.24 4828.01 0.17 chr1 4668711 4669005 294 75 5 169.17 7242.01 0.00 chr1 4669126 4669238 112 57 2 100.24 4828.01 0.17 chr1 4669537 4669752 215 108 5 174.88 12070.02 0.00 chr1 4669936 4670048 112 57 2 100.24 4828.01 0.17 chr1 4670216 4670449 233 97 6 212.68 12070.02 0.00 chr1 4673856 4674051 195 98 4 137.07 9656.01 0.00 chr1 4674349 4674478 129 65 3 137.07 7242.01 0.00 chr1 4675027 4675152 125 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