Mercurial > repos > devteam > ncbi_blast_plus

annotate ncbi_blast_plus/test-data/tblastn_four_human_vs_rhodopsin.tabular @ 1:27d7e1deada4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.0.12 of the NCBI BLAST+ wrappers. Implements genetic code option for translation searches. Changes <parallelism> to 1000 sequences at a time (to cope with very large sets of queries where BLAST+ can become memory hungry). Include warning that BLAST+ with subject FASTA gives pairwise e-values.
author peterjc
date Thu, 23 Aug 2012 07:24:38 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
1 sp|P08100|OPSD_HUMAN gi|57163782|ref|NM_001009242.1| 96.55 348 12 0 1 348 1 1044 0.0 732
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
2 sp|P08100|OPSD_HUMAN gi|2734705|gb|U59921.1|BBU59921 84.80 342 51 1 1 341 42 1067 0.0 646
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
3 sp|P08100|OPSD_HUMAN gi|283855845|gb|GQ290303.1| 93.24 74 5 0 239 312 3147 3368 1e-72 151
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
4 sp|P08100|OPSD_HUMAN gi|283855845|gb|GQ290303.1| 91.53 59 5 0 177 235 2855 3031 1e-72 126
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
5 sp|P08100|OPSD_HUMAN gi|283855845|gb|GQ290303.1| 96.40 111 4 0 11 121 1 333 1e-64 229
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
6 sp|P08100|OPSD_HUMAN gi|283855845|gb|GQ290303.1| 93.22 59 4 0 119 177 1404 1580 1e-32 122
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
7 sp|P08100|OPSD_HUMAN gi|283855845|gb|GQ290303.1| 88.46 26 3 0 312 337 4222 4299 6e-13 57.7
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
8 sp|P08100|OPSD_HUMAN gi|283855822|gb|GQ290312.1| 95.09 326 16 0 11 336 1 978 0.0 658
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
9 sp|P08100|OPSD_HUMAN gi|18148870|dbj|AB062417.1| 93.39 348 23 0 1 348 1 1044 0.0 711
27d7e1deada4 Uploaded v0.0.12 of the NCBI BLAST+ wrappers.
peterjc
parents:
diff changeset
10 sp|P08100|OPSD_HUMAN gi|12583664|dbj|AB043817.1| 82.16 342 60 1 1 341 23 1048 0.0 626