Mercurial > repos > devteam > samtools_flagstat

view test-data/samtools_flagstat_out1.txt @ 5:db17d5321bad draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit ca0d1d44099fd21e0f8214102f4d8a2fd2d054d6
author iuc
date Mon, 29 Jul 2019 08:48:13 -0400
parents cc61ade70eb8
children fe34990e5ce7
line wrap: on
line source

200 + 0 in total (QC-passed reads + QC-failed reads)
0 + 0 secondary
0 + 0 supplementary
0 + 0 duplicates
25 + 0 mapped (12.50% : N/A)
200 + 0 paired in sequencing
100 + 0 read1
100 + 0 read2
0 + 0 properly paired (0.00% : N/A)
0 + 0 with itself and mate mapped
25 + 0 singletons (12.50% : N/A)
0 + 0 with mate mapped to a different chr
0 + 0 with mate mapped to a different chr (mapQ>=5)