Mercurial > repos > dfornika > data_manager_build_kraken2_database

annotate data_manager_conf.xml @ 7:ae6180bdb1e9 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
author dfornika
date Mon, 04 Mar 2019 19:20:33 -0500
parents 1f6fe9dc5490
children 1601703ae511
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7e43f66abe9d planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
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1 <data_managers>
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2 <data_manager tool_file="data_manager/kraken2_build_standard.xml" id="kraken2_build_standard" version="1.0">
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3 <data_table name="kraken2_databases">
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4 <output>
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5 <column name="value"/>
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6 <column name="name"/>
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7 <column name="path" output_ref="out_file">
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8 <move type="directory" relativize_symlinks="True">
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9 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases</target>
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7e43f66abe9d planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
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10 </move>
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11 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases</value_translation>
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12 <value_translation type="function">abspath</value_translation>
7e43f66abe9d planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
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13 </column>
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14 </output>
7e43f66abe9d planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit cc42cd530378bfa3df83b08b6b41aaf2f5072b49-dirty
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15 </data_table>
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16 </data_manager>
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17 <data_manager tool_file="data_manager/kraken2_build_custom.xml" id="kraken2_build_custom" version="1.0">
b03007bc0f05 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit f05f93ee024df8b38efa1c92db9785d52c726f85-dirty
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18 <data_table name="kraken2_databases">
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19 <output>
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20 <column name="value"/>
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21 <column name="name"/>
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22 <column name="path" output_ref="out_file">
b03007bc0f05 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit f05f93ee024df8b38efa1c92db9785d52c726f85-dirty
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23 <move type="directory" relativize_symlinks="True">
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24 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases</target>
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25 </move>
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26 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases</value_translation>
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27 <value_translation type="function">abspath</value_translation>
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28 </column>
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29 </output>
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30 </data_table>
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31 </data_manager>
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32 <data_manager tool_file="data_manager/kraken2_build_special.xml" id="kraken2_build_special" version="1.0">
ae6180bdb1e9 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
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33 <data_table name="kraken2_databases">
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34 <output>
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35 <column name="value"/>
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36 <column name="name"/>
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37 <column name="path" output_ref="out_file">
ae6180bdb1e9 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
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38 <move type="directory" relativize_symlinks="True">
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39 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases</target>
ae6180bdb1e9 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
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40 </move>
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41 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases</value_translation>
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42 <value_translation type="function">abspath</value_translation>
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43 </column>
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44 </output>
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45 </data_table>
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46 </data_manager>
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47 </data_managers>