Mercurial > repos > diego > rtg_investigator
view tools/rtg/sdf2fasta.xml @ 1:8593828f91e7 default tip
Full galaxy wrapper
author | diego |
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date | Sat, 21 Apr 2012 21:36:15 -0400 |
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<tool id="rtg_sdf2fasta" name="Extract FASTA" force_history_refresh="True"> <description>from SDF with sdf2fasta</description> <command interpreter="bash">galaxy-rtg-sdf2fasta-wrapper.sh $output1 $output1.id $__new_file_path__ -l $l -i ${input.extra_files_path} -Z </command> <inputs> <param name="input" type="data" format="rtg_sdf" label="Source SDF"/> <param name="l" type="integer" value="80" label="Line length"/> </inputs> <outputs> <data name="output1" format="fasta"/> </outputs> <help> This tool converts an RTG SDF to FASTA. </help> </tool>