Mercurial > repos > earlhaminst > smart_domains

comparison test-data/ENSPTRP00000037441_SMART_results.txt @ 1:8c24cc7431aa draft default tip

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"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smart_domains commit 411fa9c106996050b2d2e8027e14d2068f6b14c3"
author earlhaminst
date Tue, 22 Dec 2020 04:29:12 +0000
parents a3b26189fee3
children
comparison
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0:a3b26189fee3 1:8c24cc7431aa
1
1 -- SMART RESULT TEXTFORMAT -- 2 -- SMART RESULT TEXTFORMAT --
2 3
3 CRC_PASSED=1 4 CRC_PASSED=0
4 NUMBER_OF_FEATURES_FOUND=6 5 NUMBER_OF_FEATURES_FOUND=40
6
7 DOMAIN=AlaDh_PNT_C
8 START=1
9 END=92
10 EVALUE=30933.3535994808
11 TYPE=SMART
12 STATUS=hidden|threshold
13
14 DOMAIN=Pfam:IlvN
15 START=1
16 END=52
17 EVALUE=0.0077
18 TYPE=PFAM
19 STATUS=hidden|threshold
20
21 DOMAIN=Pfam:Thi4
22 START=2
23 END=47
24 EVALUE=0.0003
25 TYPE=PFAM
26 STATUS=hidden|threshold
27
28 DOMAIN=Pfam:Pyr_redox_2
29 START=2
30 END=53
31 EVALUE=0.0011
32 TYPE=PFAM
33 STATUS=hidden|threshold
34
35 DOMAIN=Pfam:AlaDh_PNT_C
36 START=2
37 END=93
38 EVALUE=0.0037
39 TYPE=PFAM
40 STATUS=hidden|threshold
41
42 DOMAIN=Pfam:Pyr_redox_3
43 START=3
44 END=88
45 EVALUE=2.3
46 TYPE=PFAM
47 STATUS=hidden|threshold
48
49 DOMAIN=Pfam:FAD_binding_3
50 START=4
51 END=51
52 EVALUE=0.00015
53 TYPE=PFAM
54 STATUS=hidden|threshold
55
56 DOMAIN=Pfam:HI0933_like
57 START=5
58 END=44
59 EVALUE=0.017
60 TYPE=PFAM
61 STATUS=hidden|threshold
62
63 DOMAIN=Semialdhyde_dh
64 START=6
65 END=71
66 EVALUE=33445.8578229311
67 TYPE=SMART
68 STATUS=hidden|threshold
5 69
6 DOMAIN=Pfam:DAO 70 DOMAIN=Pfam:DAO
7 START=6 71 START=6
8 END=211 72 END=199
9 EVALUE=8.8e-08 73 EVALUE=6.8e-06
10 TYPE=PFAM 74 TYPE=PFAM
11 STATUS=visible|OK 75 STATUS=hidden|threshold
76
77 DOMAIN=Pfam:FAD_oxidored
78 START=6
79 END=51
80 EVALUE=1.3e-05
81 TYPE=PFAM
82 STATUS=hidden|threshold
12 83
13 DOMAIN=Pfam:FAD_binding_2 84 DOMAIN=Pfam:FAD_binding_2
14 START=6 85 START=6
15 END=45 86 END=45
16 EVALUE=1.2e-06 87 EVALUE=0.00014
17 TYPE=PFAM 88 TYPE=PFAM
18 STATUS=visible|OK 89 STATUS=visible|OK
90
91 DOMAIN=Pfam:Pyr_redox
92 START=6
93 END=51
94 EVALUE=0.0026
95 TYPE=PFAM
96 STATUS=hidden|threshold
97
98 DOMAIN=Pfam:GIDA
99 START=6
100 END=95
101 EVALUE=0.046
102 TYPE=PFAM
103 STATUS=hidden|threshold
104
105 DOMAIN=Pfam:Lycopene_cycl
106 START=6
107 END=54
108 EVALUE=0.092
109 TYPE=PFAM
110 STATUS=hidden|threshold
111
112 DOMAIN=Pfam:Trp_halogenase
113 START=6
114 END=41
115 EVALUE=0.32
116 TYPE=PFAM
117 STATUS=hidden|threshold
118
119 DOMAIN=Pfam:3HCDH_N
120 START=6
121 END=58
122 EVALUE=0.81
123 TYPE=PFAM
124 STATUS=hidden|threshold
125
126 DOMAIN=RHO
127 START=7
128 END=95
129 EVALUE=1408.30964173531
130 TYPE=SMART
131 STATUS=hidden|threshold
132
133 DOMAIN=Pfam:TrkA_N
134 START=7
135 END=56
136 EVALUE=1.1
137 TYPE=PFAM
138 STATUS=hidden|threshold
19 139
20 DOMAIN=Pfam:NAD_binding_8 140 DOMAIN=Pfam:NAD_binding_8
21 START=9 141 START=9
22 END=75 142 END=75
23 EVALUE=5.2e-15 143 EVALUE=1e-12
24 TYPE=PFAM 144 TYPE=PFAM
25 STATUS=visible|OK 145 STATUS=visible|OK
26 146
27 DOMAIN=Pfam:Amino_oxidase 147 DOMAIN=Pfam:Amino_oxidase
28 START=14 148 START=14
29 END=451 149 END=451
30 EVALUE=7.1e-74 150 EVALUE=3.2e-71
31 TYPE=PFAM 151 TYPE=PFAM
32 STATUS=visible|OK 152 STATUS=visible|OK
153
154 DOMAIN=Fapy_DNA_glyco
155 START=30
156 END=141
157 EVALUE=84644.2966082717
158 TYPE=SMART
159 STATUS=hidden|threshold
160
161 DOMAIN=Dynein_light
162 START=44
163 END=121
164 EVALUE=51136.8774244005
165 TYPE=SMART
166 STATUS=hidden|threshold
167
168 DOMAIN=GGL
169 START=61
170 END=121
171 EVALUE=571.480606829398
172 TYPE=SMART
173 STATUS=hidden|threshold
174
175 DOMAIN=PLP
176 START=137
177 END=179
178 EVALUE=1537.7843005764
179 TYPE=SMART
180 STATUS=hidden|threshold
181
182 DOMAIN=DUF4187
183 START=137
184 END=178
185 EVALUE=129170.041311882
186 TYPE=SMART
187 STATUS=hidden|threshold
188
189 DOMAIN=Pfam:Pyr_redox_2
190 START=189
191 END=265
192 EVALUE=7.2e+02
193 TYPE=PFAM
194 STATUS=hidden|threshold
195
196 DOMAIN=GIYc
197 START=192
198 END=274
199 EVALUE=865.846926520416
200 TYPE=SMART
201 STATUS=hidden|threshold
202
203 DOMAIN=KH
204 START=193
205 END=266
206 EVALUE=1251.28367939458
207 TYPE=SMART
208 STATUS=hidden|threshold
209
210 DOMAIN=Pfam:TrkA_N
211 START=210
212 END=266
213 EVALUE=1.3e+02
214 TYPE=PFAM
215 STATUS=hidden|threshold
216
217 DOMAIN=Pfam:Pyr_redox_3
218 START=218
219 END=265
220 EVALUE=19
221 TYPE=PFAM
222 STATUS=hidden|threshold
223
224 DOMAIN=Pfam:3HCDH_N
225 START=235
226 END=282
227 EVALUE=3.3e+03
228 TYPE=PFAM
229 STATUS=hidden|threshold
230
231 DOMAIN=Pfam:TrkA_N
232 START=329
233 END=375
234 EVALUE=8.1e+03
235 TYPE=PFAM
236 STATUS=hidden|threshold
237
238 DOMAIN=DnaJ
239 START=335
240 END=377
241 EVALUE=476.301934189143
242 TYPE=SMART
243 STATUS=hidden|threshold
244
245 DOMAIN=HELICc2
246 START=337
247 END=430
248 EVALUE=239.70161728886
249 TYPE=SMART
250 STATUS=hidden|threshold
251
252 DOMAIN=DUF1713
253 START=340
254 END=363
255 EVALUE=170644.3529947
256 TYPE=SMART
257 STATUS=hidden|threshold
258
259 DOMAIN=Pfam:GIDA
260 START=392
261 END=456
262 EVALUE=1.8e+02
263 TYPE=PFAM
264 STATUS=hidden|threshold
33 265
34 DOMAIN=low_complexity_region 266 DOMAIN=low_complexity_region
35 START=437 267 START=437
36 END=449 268 END=449
37 EVALUE=0 269 EVALUE=0
43 END=512 275 END=512
44 EVALUE=0 276 EVALUE=0
45 TYPE=INTRINSIC 277 TYPE=INTRINSIC
46 STATUS=visible|OK 278 STATUS=visible|OK
47 279
280 DOMAIN=IQ
281 START=494
282 END=516
283 EVALUE=808.328375610961
284 TYPE=SMART
285 STATUS=hidden|threshold
286
48 -- FINISHED -- 287 -- FINISHED --