view test-data/ENSPTRP00000037441_SMART_results.txt @ 1:8c24cc7431aa draft default tip

"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smart_domains commit 411fa9c106996050b2d2e8027e14d2068f6b14c3"
author earlhaminst
date Tue, 22 Dec 2020 04:29:12 +0000
parents a3b26189fee3
children
line wrap: on
line source


-- SMART RESULT TEXTFORMAT --

CRC_PASSED=0
NUMBER_OF_FEATURES_FOUND=40

DOMAIN=AlaDh_PNT_C
START=1
END=92
EVALUE=30933.3535994808
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:IlvN
START=1
END=52
EVALUE=0.0077
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Thi4
START=2
END=47
EVALUE=0.0003
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Pyr_redox_2
START=2
END=53
EVALUE=0.0011
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:AlaDh_PNT_C
START=2
END=93
EVALUE=0.0037
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Pyr_redox_3
START=3
END=88
EVALUE=2.3
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:FAD_binding_3
START=4
END=51
EVALUE=0.00015
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:HI0933_like
START=5
END=44
EVALUE=0.017
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Semialdhyde_dh
START=6
END=71
EVALUE=33445.8578229311
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:DAO
START=6
END=199
EVALUE=6.8e-06
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:FAD_oxidored
START=6
END=51
EVALUE=1.3e-05
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:FAD_binding_2
START=6
END=45
EVALUE=0.00014
TYPE=PFAM
STATUS=visible|OK

DOMAIN=Pfam:Pyr_redox
START=6
END=51
EVALUE=0.0026
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:GIDA
START=6
END=95
EVALUE=0.046
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Lycopene_cycl
START=6
END=54
EVALUE=0.092
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Trp_halogenase
START=6
END=41
EVALUE=0.32
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:3HCDH_N
START=6
END=58
EVALUE=0.81
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=RHO
START=7
END=95
EVALUE=1408.30964173531
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:TrkA_N
START=7
END=56
EVALUE=1.1
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:NAD_binding_8
START=9
END=75
EVALUE=1e-12
TYPE=PFAM
STATUS=visible|OK

DOMAIN=Pfam:Amino_oxidase
START=14
END=451
EVALUE=3.2e-71
TYPE=PFAM
STATUS=visible|OK

DOMAIN=Fapy_DNA_glyco
START=30
END=141
EVALUE=84644.2966082717
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Dynein_light
START=44
END=121
EVALUE=51136.8774244005
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=GGL
START=61
END=121
EVALUE=571.480606829398
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=PLP
START=137
END=179
EVALUE=1537.7843005764
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=DUF4187
START=137
END=178
EVALUE=129170.041311882
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:Pyr_redox_2
START=189
END=265
EVALUE=7.2e+02
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=GIYc
START=192
END=274
EVALUE=865.846926520416
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=KH
START=193
END=266
EVALUE=1251.28367939458
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:TrkA_N
START=210
END=266
EVALUE=1.3e+02
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:Pyr_redox_3
START=218
END=265
EVALUE=19
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:3HCDH_N
START=235
END=282
EVALUE=3.3e+03
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=Pfam:TrkA_N
START=329
END=375
EVALUE=8.1e+03
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=DnaJ
START=335
END=377
EVALUE=476.301934189143
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=HELICc2
START=337
END=430
EVALUE=239.70161728886
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=DUF1713
START=340
END=363
EVALUE=170644.3529947
TYPE=SMART
STATUS=hidden|threshold

DOMAIN=Pfam:GIDA
START=392
END=456
EVALUE=1.8e+02
TYPE=PFAM
STATUS=hidden|threshold

DOMAIN=low_complexity_region
START=437
END=449
EVALUE=0
TYPE=INTRINSIC
STATUS=hidden|overlap

DOMAIN=transmembrane_domain
START=490
END=512
EVALUE=0
TYPE=INTRINSIC
STATUS=visible|OK

DOMAIN=IQ
START=494
END=516
EVALUE=808.328375610961
TYPE=SMART
STATUS=hidden|threshold

-- FINISHED --