Mercurial > repos > earlhaminst > smart_domains

diff test-data/ENSPTRP00000037441_SMART_results.txt @ 1:8c24cc7431aa draft default tip

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"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/smart_domains commit 411fa9c106996050b2d2e8027e14d2068f6b14c3"
author earlhaminst
date Tue, 22 Dec 2020 04:29:12 +0000
parents a3b26189fee3
children
line wrap: on
line diff
--- a/test-data/ENSPTRP00000037441_SMART_results.txt	Thu Jun 15 07:52:09 2017 -0400
+++ b/test-data/ENSPTRP00000037441_SMART_results.txt	Tue Dec 22 04:29:12 2020 +0000
@@ -1,36 +1,268 @@
+
 -- SMART RESULT TEXTFORMAT --
 
-CRC_PASSED=1
-NUMBER_OF_FEATURES_FOUND=6
+CRC_PASSED=0
+NUMBER_OF_FEATURES_FOUND=40
+
+DOMAIN=AlaDh_PNT_C
+START=1
+END=92
+EVALUE=30933.3535994808
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:IlvN
+START=1
+END=52
+EVALUE=0.0077
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Thi4
+START=2
+END=47
+EVALUE=0.0003
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Pyr_redox_2
+START=2
+END=53
+EVALUE=0.0011
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:AlaDh_PNT_C
+START=2
+END=93
+EVALUE=0.0037
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Pyr_redox_3
+START=3
+END=88
+EVALUE=2.3
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:FAD_binding_3
+START=4
+END=51
+EVALUE=0.00015
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:HI0933_like
+START=5
+END=44
+EVALUE=0.017
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Semialdhyde_dh
+START=6
+END=71
+EVALUE=33445.8578229311
+TYPE=SMART
+STATUS=hidden|threshold
 
 DOMAIN=Pfam:DAO
 START=6
-END=211
-EVALUE=8.8e-08
+END=199
+EVALUE=6.8e-06
 TYPE=PFAM
-STATUS=visible|OK
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:FAD_oxidored
+START=6
+END=51
+EVALUE=1.3e-05
+TYPE=PFAM
+STATUS=hidden|threshold
 
 DOMAIN=Pfam:FAD_binding_2
 START=6
 END=45
-EVALUE=1.2e-06
+EVALUE=0.00014
 TYPE=PFAM
 STATUS=visible|OK
 
+DOMAIN=Pfam:Pyr_redox
+START=6
+END=51
+EVALUE=0.0026
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:GIDA
+START=6
+END=95
+EVALUE=0.046
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Lycopene_cycl
+START=6
+END=54
+EVALUE=0.092
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Trp_halogenase
+START=6
+END=41
+EVALUE=0.32
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:3HCDH_N
+START=6
+END=58
+EVALUE=0.81
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=RHO
+START=7
+END=95
+EVALUE=1408.30964173531
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:TrkA_N
+START=7
+END=56
+EVALUE=1.1
+TYPE=PFAM
+STATUS=hidden|threshold
+
 DOMAIN=Pfam:NAD_binding_8
 START=9
 END=75
-EVALUE=5.2e-15
+EVALUE=1e-12
 TYPE=PFAM
 STATUS=visible|OK
 
 DOMAIN=Pfam:Amino_oxidase
 START=14
 END=451
-EVALUE=7.1e-74
+EVALUE=3.2e-71
 TYPE=PFAM
 STATUS=visible|OK
 
+DOMAIN=Fapy_DNA_glyco
+START=30
+END=141
+EVALUE=84644.2966082717
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Dynein_light
+START=44
+END=121
+EVALUE=51136.8774244005
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=GGL
+START=61
+END=121
+EVALUE=571.480606829398
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=PLP
+START=137
+END=179
+EVALUE=1537.7843005764
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=DUF4187
+START=137
+END=178
+EVALUE=129170.041311882
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Pyr_redox_2
+START=189
+END=265
+EVALUE=7.2e+02
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=GIYc
+START=192
+END=274
+EVALUE=865.846926520416
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=KH
+START=193
+END=266
+EVALUE=1251.28367939458
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:TrkA_N
+START=210
+END=266
+EVALUE=1.3e+02
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:Pyr_redox_3
+START=218
+END=265
+EVALUE=19
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:3HCDH_N
+START=235
+END=282
+EVALUE=3.3e+03
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:TrkA_N
+START=329
+END=375
+EVALUE=8.1e+03
+TYPE=PFAM
+STATUS=hidden|threshold
+
+DOMAIN=DnaJ
+START=335
+END=377
+EVALUE=476.301934189143
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=HELICc2
+START=337
+END=430
+EVALUE=239.70161728886
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=DUF1713
+START=340
+END=363
+EVALUE=170644.3529947
+TYPE=SMART
+STATUS=hidden|threshold
+
+DOMAIN=Pfam:GIDA
+START=392
+END=456
+EVALUE=1.8e+02
+TYPE=PFAM
+STATUS=hidden|threshold
+
 DOMAIN=low_complexity_region
 START=437
 END=449
@@ -45,4 +277,11 @@
 TYPE=INTRINSIC
 STATUS=visible|OK
 
+DOMAIN=IQ
+START=494
+END=516
+EVALUE=808.328375610961
+TYPE=SMART
+STATUS=hidden|threshold
+
 -- FINISHED --