view ct_get_tool_pvals.xml @ 2:4f8f5edb82c4 draft

"planemo upload for repository commit c6a3af3aa798c106d1a8f3e2bf1aef5251d0bb7e"
author ebi-gxa
date Mon, 27 Apr 2020 09:31:14 -0400
parents f2ffa4fd4c2a
children 39f348e76f41
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<tool id="ct_get_tool_pvals" name="Cell types - get tool p-values" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
    <description>Get p-values for tool performance metrics</description>
    <expand macro="requirements" />
    <command detect_errors="exit_code"><![CDATA[
        get_tool_pvals.R --input-table "${input_table}" --emp-dist-list "${emp_dist_list}" --output-table "${output_table}" ]]></command>
        <param type="data" name="input_table" label="Table with tool stats" format="txt" help="Path to the table of tool statistics from get_tool_performance_table.R" />
        <param type="data" name="emp_dist_list" label="List of empirical distributions" format="rdata" help="Path to the list of empirical distributions in .rds format" />
        <data name="output_table" format="txt" />
            <param name="input_table" value="tool_perf_table.tsv" />
            <param name="emp_dist_list" value="empirical_dist_list.rds" />
            <output name="output_table" file="tool_perf_pvals.tsv" compare="sim_size" />
    <expand macro="citations" />