Mercurial > repos > ebi-gxa > scanpy_find_markers

changeset 28:eb01a7e59e9a draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 9ea121884e1aecd2ee66a0686057cb3ed904b9eb-dirty"
author ebi-gxa
date Thu, 28 Oct 2021 10:04:02 +0000
parents 0fc4e76c5c0d
children 81c34e67f262
files scanpy-find-markers.xml scanpy_macros2.xml
diffstat 2 files changed, 5 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/scanpy-find-markers.xml	Fri Oct 15 15:10:30 2021 +0000
+++ b/scanpy-find-markers.xml	Thu Oct 28 10:04:02 2021 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_find_markers" name="Scanpy FindMarkers" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
+<tool id="scanpy_find_markers" name="Scanpy FindMarkers" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
   <description>to find differentially expressed genes between groups</description>
   <macros>
     <import>scanpy_macros2.xml</import>
--- a/scanpy_macros2.xml	Fri Oct 15 15:10:30 2021 +0000
+++ b/scanpy_macros2.xml	Thu Oct 28 10:04:02 2021 +0000
@@ -1,10 +1,12 @@
 <macros>
-  <token name="@TOOL_VERSION@">1.8.1+2</token>
+  <token name="@TOOL_VERSION@">1.8.1+3</token>
   <token name="@HELP@">More information can be found at https://scanpy.readthedocs.io</token>
   <token name="@PROFILE@">18.01</token>
   <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 
+1.8.1+3+galaxy0: Upate to scanpy-scripts 1.1.3 (running scanpy ==1.8.1), including a fix to MTX output and a bugfix for the Scrublet wrapper.
+
 1.8.1+2+galaxy0: Upate to scanpy-scripts 1.1.2 (running scanpy ==1.8.1), including improved boolean handling for mito etc.
 
 1.8.1+1+galaxy0: Upate to scanpy-scripts 1.1.1 build 1 (running scanpy ==1.8.1), including improved Scrublet integration with batch handling.
@@ -65,7 +67,7 @@
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="1.1.2">scanpy-scripts</requirement>
+      <requirement type="package" version="1.1.3">scanpy-scripts</requirement>
       <yield/>
     </requirements>
   </xml>