Mercurial > repos > ebi-gxa > scanpy_run_diffmap

diff scanpy-run-diffmap.xml @ 4:47603f46d6d9 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 400799f99ee36ad12b990b1ccabf4be16a26c003
author ebi-gxa
date Mon, 25 Nov 2019 14:40:35 -0500
parents 34d65f2ccde3
children f5ebfe244c14
line wrap: on
line diff
--- a/scanpy-run-diffmap.xml	Wed Nov 20 05:17:43 2019 -0500
+++ b/scanpy-run-diffmap.xml	Mon Nov 25 14:40:35 2019 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_run_diffmap" name="Scanpy DiffusionMap" version="@TOOL_VERSION@+galaxy0">
+<tool id="scanpy_run_diffmap" name="Scanpy DiffusionMap" version="@TOOL_VERSION@+galaxy6">
   <description>calculate diffusion components</description>
   <macros>
     <import>scanpy_macros2.xml</import>
@@ -36,7 +36,7 @@
   </inputs>
 
   <outputs>
-    <data name="output_h5" format="h5" from_work_dir="output.h5" label="${tool.name} on ${on_string}: diffmap object"/>
+    <expand macro="output_data_obj" description="Diffussion Map"/>
     <data name="output_embed" format="tsv" from_work_dir="embed.tsv" label="${tool.name} on ${on_string}: diffmap embedding">
       <filter>export_embed</filter>
     </data>