Mercurial > repos > ebi-gxa > seurat_export_cellbrowser
changeset 4:e7d338f8c4fc draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
| author | ebi-gxa |
|---|---|
| date | Fri, 27 Nov 2020 13:47:13 +0000 |
| parents | a18f8d34524a |
| children | 249392cd0d99 |
| files | seurat_export_cellbrowser.xml seurat_macros.xml |
| diffstat | 2 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/seurat_export_cellbrowser.xml Sat Jul 11 08:42:05 2020 -0400 +++ b/seurat_export_cellbrowser.xml Fri Nov 27 13:47:13 2020 +0000 @@ -24,7 +24,7 @@ <inputs> <expand macro="input_object_params"/> - <param name="markers_file" type="data" format="txt" label="Marker genes file from Seurat" /> + <param name="markers_file" type="data" optional="True" format="txt" label="Marker genes file from Seurat" /> </inputs> <outputs> @@ -33,9 +33,8 @@ <tests> <test> - <param name="rds_input" ftype="rdata" value="out_runtsne.rds"/> - <param name="markers_file" ftype="txt" value="out_markers.csv"/> - <output name="output" ftype="tar" value="out_cellbrowser_bundle.tar"/> + <param name="rds_seurat_file" ftype="rdata" value="tsne_seurat.rds"/> + <output name="output" value="html_out" compare="sim_size" delta="1000000"/> </test> </tests> <help><![CDATA[
--- a/seurat_macros.xml Sat Jul 11 08:42:05 2020 -0400 +++ b/seurat_macros.xml Fri Nov 27 13:47:13 2020 +0000 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <macros> - <token name="@VERSION@">0.0.7</token> - <token name="@SEURAT_VERSION@">3.1.1</token> + <token name="@VERSION@">0.0.8</token> + <token name="@SEURAT_VERSION@">3.1.2</token> <xml name="requirements"> <requirements> <requirement type="package" version="@VERSION@">seurat-scripts</requirement> @@ -96,6 +96,7 @@ <token name="@VERSION_HISTORY@"><![CDATA[ **Version history** +3.1.2_0.0.8: Upd ate metadata parsing 3.1.1_0.0.7: Exposes perplexity and enables tab input.