Mercurial > repos > ecology > iabiodiv_smartbiodiv_med_environ

diff med_environ.py @ 1:b79faea33a8a draft

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planemo upload for repository https://github.com/jeremyfix/medenv commit 56fa523a7852e06962a05a05224ca193c25e20bc
author ecology
date Sat, 24 Feb 2024 18:12:18 +0000
parents f82f266381be
children
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line diff
--- a/med_environ.py	Thu Feb 15 20:01:29 2024 +0000
+++ b/med_environ.py	Sat Feb 24 18:12:18 2024 +0000
@@ -63,11 +63,10 @@
 
     # Loads the input dataset
     df = pd.read_csv(args.datafile, sep="\t")
-    lat_key = df.columns[args.lat_key]
-    long_key = df.columns[args.long_key]
-    depth_key = df.columns[args.depth_key]
-    date_key = df.columns[args.date_key]
-    print(lat_key, long_key, depth_key, date_key)
+    lat_key = df.columns[args.lat_key - 1]
+    long_key = df.columns[args.long_key - 1]
+    depth_key = df.columns[args.depth_key - 1]
+    date_key = df.columns[args.date_key - 1]
 
     df = df.apply(
         environment_observation,