view hmmpress.xml @ 3:c0fb858f44a2 draft default tip

fix domtblout hdr
author Edward Kirton <eskirton@lbl.gov>
date Tue, 11 Sep 2012 00:40:34 -0700
parents c16d8db9338a
children
line wrap: on
line source

<tool id="hmmpress" name="hmmpress" version="1.0.0">
<description>Compress profile db</description>
<command interpreter="perl">hmmpress_wrapper.pl $infile $outfile $outfile.extra_files_path</command>
<inputs>
    <param name="infile" type="data" format="hmm" label="HMM profile Db" help="Created by hmmbuild" />
</inputs>
<outputs>
    <data name="outfile" format="hmmpressed" />
</outputs>
<help>
**What It Does**

Starting from a profile database in standard HMMER3 format, construct binary compressed datafiles for hmmscan.

The hmmpress step is required for hmmscan to work.
</help>
</tool>