Mercurial > repos > galaxyp > proteinpilot
changeset 2:ebeaa403d9eb
improved some datatype handling
| author | galaxyp |
|---|---|
| date | Thu, 20 Jun 2013 10:50:41 -0400 |
| parents | 790d80981060 |
| children | 4afba45f01e8 |
| files | galaxyp-toolshed-proteinpilot |
| diffstat | 1 files changed, 1253 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/galaxyp-toolshed-proteinpilot Thu Jun 20 10:50:41 2013 -0400 @@ -0,0 +1,1253 @@ +<!DOCTYPE html> +<html lang="en"> +<head> + <meta http-equiv="X-UA-Compatible" content="IE=edge" /> + <meta charset="utf-8"> + <title> + galaxyp / galaxyp-toolshed-proteinpilot — Bitbucket +</title> + <link rel="icon" type="image/png" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/img/favicon.png"> + <meta id="bb-canon-url" name="bb-canon-url" content="https://bitbucket.org"> + + +<link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/compressed/css/4c9fb96cff70.css" type="text/css" /> +<link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/compressed/css/8cc3605411c7.css" type="text/css" /> + + <!--[if lt IE 9]><link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/css/aui/aui-ie.css" media="all"><![endif]--> + <!--[if IE 9]><link rel="stylesheet" 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We're also free for small teams! + + </p> + <a class="aui-button aui-button-primary aui-style signup-button" href="/account/signup/">Sign up for free</a> + <span class="close aui-icon aui-icon-small aui-iconfont-close-dialog" title="Dismiss this banner">Close</span> + </div> +</section> + + + + + + <section id="readme"> + + <article class="readme file"> + <p>TODO: Document this tool repository.</p> +<h1 id="markdown-header-obtaining-tools">Obtaining Tools</h1> +<p>Repositories for all Galaxy-P tools can be found at +https:/bitbucket.org/galaxyp/.</p> +<h1 id="markdown-header-contact">Contact</h1> +<p>Please send suggestions for improvements and bug reports to +jmchilton@gmail.com.</p> +<h1 id="markdown-header-license">License</h1> +<p>All Galaxy-P tools are licensed under the Apache License Version 2.0 +unless otherwise documented.</p> +<h1 id="markdown-header-tool-versioning">Tool Versioning</h1> +<p>Galaxy-P tools will have versions of the form X.Y.Z. Versions +differing only after the second decimal should be completely +compatible with each other. Breaking changes should result in an +increment of the number before and/or after the first decimal. All +tools of version less than 1.0.0 should be considered beta.</p> + </article> + + </section> + + + + <section id="repo-activity"> + <h1> + Recent activity + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/rss" class="icon rss">RSS feed fo galaxyp-toolshed-proteinpilot</a> + </h1> + + + + + + + + + +<div class="newsfeed"> + + + + + + + + + + + + <article class="news-item commit"> + <span class="icon commit"></span> + + + + <a href="/galaxyp"><img alt="galaxyp" src="https://secure.gravatar.com/avatar/655358b258b3fbd64aa5c6f42adade4e?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_team_avatar%2F32%2Fteam_blue.png&s=32" class="avatar avatar32" /></a> + + + <p> + + + <a href="/galaxyp">galaxyp</a> + + pushed 1 commit to + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + + + </p> + <time datetime="2013-06-20T14:34:36+00:00">16 minutes ago</time> + + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/478c9dfebeb1844401c1f5fcf6a55fefa6796655" class="changeset-hash">478c9df</a> + - + + + improved some datatype handling + + + </div> + + + </article> + + + + + + + + + + + + + + + + </article> + + + + + + + <article class="news-item commit"> + <span class="icon commit"></span> + + + + <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> + + + <p> + + + <a href="/jmchilton">John Chilton</a> + + pushed 1 commit to + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + + + </p> + <time datetime="2013-05-05T19:06:30+00:00">2013-05-05</time> + + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/eeb0664db8240d23a79fc406b6ae7c39f8159291" class="changeset-hash">eeb0664</a> + - + + + Add TMT options to protein pilot. + + + </div> + + + </article> + + + + + + + + + + + + + + + + + + + <article class="news-item commit"> + <span class="icon commit"></span> + + + + <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> + + + <p> + + + <a href="/jmchilton">John Chilton</a> + + pushed 1 commit to + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + + + </p> + <time datetime="2013-04-22T15:57:02+00:00">2013-04-22</time> + + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/3d9ab1d73205383c046a753bf779f707ae616d57" class="changeset-hash">3d9ab1d</a> + - + + + Fix name versus display_name property access. + + + </div> + + + </article> + + + + + + + + + + + + + + + + + + + <article class="news-item commit"> + <span class="icon commit"></span> + + + + <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> + + + <p> + + + <a href="/jmchilton">John Chilton</a> + + pushed 1 commit to + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + + + </p> + <time datetime="2013-04-16T04:24:45+00:00">2013-04-16</time> + + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/51a040d6310f38d2fb138acf6fb0a945a4532844" class="changeset-hash">51a040d</a> + - + + + Use config file to store input names and paths. This results in dramatically smaller command-lines (worry we are hitting the upperlimit of what Windows allows). + + + </div> + + + </article> + + + + + + + + + + + + + + + + </article> + + + + + <article class="news-item commit"> + <span class="icon commit"></span> + + + + <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> + + + <p> + Commits by + + <a href="/jmchilton">John Chilton</a> + + were pushed to + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + + + </p> + <time datetime="2013-02-08T18:44:07+00:00">2013-02-08</time> + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/83f810baa907de50e87aa2efde99e088" class="changeset-hash">83f810b</a> + - + + Add None as digestion option. + + </div> + + + + + + + + + + + + + <div class="changeset"> + <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/d2a889605d117c8bca26124d372841c1" class="changeset-hash">d2a8896</a> + - + + Initial commit. + + </div> + + + + + + + + + + + + + </article> + + + + + + + + <article class="news-item create"> + <span class="icon create"></span> + + + + <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> + + + + <p> + + + <a href="/jmchilton">John Chilton</a> + + created + + +<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> + +</p> + + + <time datetime="2012-08-13T18:27:01+00:00">2012-08-13</time> + + + + + + + + </article> + + + + + +</div> + + + + + + + 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