Mercurial > repos > galaxyp > thermo_raw_file_converter
annotate test-data/really_small.indexed_mzML @ 10:b9b385097f13 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
author | galaxyp |
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date | Sat, 10 Apr 2021 15:56:48 +0000 |
parents | 92ac8e086317 |
children | 19e45916daf9 |
rev | line source |
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10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
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1 <?xml version="1.0" encoding="utf-8"?> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2 <indexedmzML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" xmlns="http://psi.hupo.org/ms/mzml"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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3 <mzML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" version="1.1.0" id="really_small"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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4 <cvList count="2"> |
10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
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5 <cv id="MS" fullName="Mass spectrometry ontology" version="4.1.48" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" /> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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6 <cv id="UO" fullName="Unit Ontology" version="09:04:2014" URI="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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7 </cvList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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8 <fileDescription> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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9 <fileContent> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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10 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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11 <cvParam cvRef="MS" accession="MS:1000580" value="" name="MSn spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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12 <cvParam cvRef="MS" accession="MS:1000810" value="" name="ion current chromatogram" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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13 </fileContent> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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14 <sourceFileList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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15 <sourceFile id="RAW1" name="really_small" location="file:///really_small.raw"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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16 <cvParam cvRef="MS" accession="MS:1000768" value="" name="Thermo nativeID format" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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17 <cvParam cvRef="MS" accession="MS:1000563" value="" name="Thermo RAW format" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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18 <cvParam cvRef="MS" accession="MS:1000569" value="a6c0d318207b271d5e2f31b3302239e040c66dbe" name="SHA-1" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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19 </sourceFile> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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20 </sourceFileList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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21 </fileDescription> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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22 <referenceableParamGroupList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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23 <referenceableParamGroup id="commonInstrumentParams"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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24 <cvParam cvRef="MS" accession="MS:1002416" value="" name="Orbitrap Fusion" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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25 <cvParam cvRef="MS" accession="MS:1000529" value="FSN10188" name="instrument serial number" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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26 </referenceableParamGroup> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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27 </referenceableParamGroupList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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28 <softwareList count="1"> |
10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
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29 <software id="ThermoRawFileParser" version="1.3.3"> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
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30 <cvParam cvRef="MS" accession="MS:1003145" name="ThermoRawFileParser" /> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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31 </software> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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32 </softwareList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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33 <instrumentConfigurationList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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34 <instrumentConfiguration id="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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35 <referenceableParamGroupRef ref="commonInstrumentParams" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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36 <componentList count="3"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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37 <source order="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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38 <cvParam cvRef="MS" accession="MS:1000398" value="" name="nanoelectrospray" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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39 </source> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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40 <analyzer order="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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41 <cvParam cvRef="MS" accession="MS:1000079" value="" name="fourier transform ion cyclotron resonance mass spectrometer" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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42 </analyzer> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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43 <detector order="3"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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44 <cvParam cvRef="MS" accession="MS:1000624" value="" name="inductive detector" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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45 </detector> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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46 </componentList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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47 </instrumentConfiguration> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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48 </instrumentConfigurationList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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49 <dataProcessingList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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50 <dataProcessing id="ThermoRawFileParserProcessing"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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51 <processingMethod order="0" softwareRef="ThermoRawFileParser"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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52 <cvParam cvRef="MS" accession="MS:1000544" value="" name="Conversion to mzML" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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53 </processingMethod> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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54 <processingMethod order="1" softwareRef="ThermoRawFileParser"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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55 <cvParam cvRef="MS" accession="MS:1000035" value="" name="peak picking" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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56 </processingMethod> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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57 </dataProcessing> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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58 </dataProcessingList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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59 <run id="really_small" defaultInstrumentConfigurationRef="IC1" startTimeStamp="2019-03-25T11:30:48.075Z" defaultSourceFileRef="RAW1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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60 <spectrumList count="67" defaultDataProcessingRef="ThermoRawFileParserProcessing"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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61 <spectrum id="controllerType=0 controllerNumber=1 scan=1" index="0" defaultArrayLength="136"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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62 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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63 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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64 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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65 <cvParam cvRef="MS" accession="MS:1000285" value="464386.25" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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66 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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67 <cvParam cvRef="MS" accession="MS:1000504" value="536.163879394531" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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68 <cvParam cvRef="MS" accession="MS:1000505" value="70424.4453125" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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69 <cvParam cvRef="MS" accession="MS:1000528" value="402.178924560547" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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70 <cvParam cvRef="MS" accession="MS:1000527" value="1056.98364257813" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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71 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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81 </scanWindow> |
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82 </scanWindowList> |
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galaxyp
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83 </scan> |
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84 </scanList> |
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123 </scanList> |
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138 </spectrum> |
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149 <scanList count="1"> |
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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159 </scanWindow> |
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galaxyp
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160 </scanWindowList> |
92ac8e086317
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galaxyp
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161 </scan> |
92ac8e086317
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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galaxyp
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changeset
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galaxyp
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changeset
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395 </scan> |
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galaxyp
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396 </scanList> |
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galaxyp
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galaxyp
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432 </scanWindow> |
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433 </scanWindowList> |
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434 </scan> |
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435 </scanList> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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507 <scanWindow> |
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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510 </scanWindow> |
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galaxyp
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511 </scanWindowList> |
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galaxyp
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512 </scan> |
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galaxyp
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513 </scanList> |
92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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522 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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diff
changeset
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528 </spectrum> |
92ac8e086317
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galaxyp
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diff
changeset
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529 <spectrum id="controllerType=0 controllerNumber=1 scan=13" index="12" defaultArrayLength="82"> |
92ac8e086317
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galaxyp
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diff
changeset
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530 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
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diff
changeset
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531 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
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galaxyp
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changeset
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532 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
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changeset
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533 <cvParam cvRef="MS" accession="MS:1000285" value="180180.125" name="total ion current" /> |
92ac8e086317
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galaxyp
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diff
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534 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
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galaxyp
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535 <cvParam cvRef="MS" accession="MS:1000504" value="536.163818359375" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
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536 <cvParam cvRef="MS" accession="MS:1000505" value="27084.865234375" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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537 <cvParam cvRef="MS" accession="MS:1000528" value="407.739196777344" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
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538 <cvParam cvRef="MS" accession="MS:1000527" value="1092.19213867188" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
|
539 <scanList count="1"> |
92ac8e086317
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galaxyp
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540 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
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galaxyp
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changeset
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541 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
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changeset
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542 <cvParam cvRef="MS" accession="MS:1000016" value="1.00966218" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
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galaxyp
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changeset
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543 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
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galaxyp
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544 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
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galaxyp
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changeset
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545 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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changeset
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546 <scanWindow> |
92ac8e086317
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galaxyp
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changeset
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547 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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548 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
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549 </scanWindow> |
92ac8e086317
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galaxyp
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diff
changeset
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550 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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551 </scan> |
92ac8e086317
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galaxyp
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changeset
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552 </scanList> |
92ac8e086317
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galaxyp
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changeset
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553 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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554 <binaryDataArray encodedLength="492"> |
92ac8e086317
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galaxyp
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555 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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galaxyp
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changeset
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567 </spectrum> |
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galaxyp
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galaxyp
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changeset
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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changeset
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580 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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92ac8e086317
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galaxyp
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galaxyp
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galaxyp
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changeset
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92ac8e086317
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galaxyp
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changeset
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585 <scanWindow> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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587 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
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588 </scanWindow> |
92ac8e086317
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galaxyp
parents:
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changeset
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589 </scanWindowList> |
92ac8e086317
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galaxyp
parents:
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changeset
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590 </scan> |
92ac8e086317
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galaxyp
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changeset
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591 </scanList> |
92ac8e086317
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galaxyp
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changeset
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592 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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593 <binaryDataArray encodedLength="376"> |
92ac8e086317
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galaxyp
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594 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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595 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
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596 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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changeset
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600 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
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galaxyp
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92ac8e086317
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galaxyp
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602 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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604 </binaryDataArray> |
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galaxyp
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605 </binaryDataArrayList> |
92ac8e086317
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galaxyp
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changeset
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606 </spectrum> |
92ac8e086317
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galaxyp
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changeset
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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changeset
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617 <scanList count="1"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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619 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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623 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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624 <scanWindow> |
92ac8e086317
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galaxyp
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625 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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626 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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627 </scanWindow> |
92ac8e086317
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galaxyp
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changeset
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628 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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629 </scan> |
92ac8e086317
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galaxyp
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changeset
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630 </scanList> |
92ac8e086317
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galaxyp
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631 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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galaxyp
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633 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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635 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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668 </scan> |
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92ac8e086317
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885 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
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888 <cvParam cvRef="MS" accession="MS:1000528" value="400.325042724609" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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889 <cvParam cvRef="MS" accession="MS:1000527" value="1156.51525878906" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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890 <scanList count="1"> |
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891 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
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892 <scan instrumentConfigurationRef="IC1"> |
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894 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
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896 <scanWindowList count="1"> |
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897 <scanWindow> |
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898 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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899 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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900 </scanWindow> |
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galaxyp
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901 </scanWindowList> |
92ac8e086317
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changeset
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902 </scan> |
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galaxyp
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903 </scanList> |
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904 <binaryDataArrayList count="2"> |
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905 <binaryDataArray encodedLength="336"> |
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906 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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912 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
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940 </scanWindowList> |
92ac8e086317
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changeset
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941 </scan> |
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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955 </binaryDataArray> |
92ac8e086317
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galaxyp
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956 </binaryDataArrayList> |
92ac8e086317
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galaxyp
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957 </spectrum> |
92ac8e086317
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galaxyp
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958 <spectrum id="controllerType=0 controllerNumber=1 scan=24" index="23" defaultArrayLength="138"> |
92ac8e086317
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959 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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963 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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967 <cvParam cvRef="MS" accession="MS:1000527" value="1196.8125" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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968 <scanList count="1"> |
92ac8e086317
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92ac8e086317
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970 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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978 </scanWindow> |
92ac8e086317
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galaxyp
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979 </scanWindowList> |
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galaxyp
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980 </scan> |
92ac8e086317
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galaxyp
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981 </scanList> |
92ac8e086317
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galaxyp
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982 <binaryDataArrayList count="2"> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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1006 <cvParam cvRef="MS" accession="MS:1000527" value="1186.07641601563" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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1007 <scanList count="1"> |
92ac8e086317
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1008 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
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galaxyp
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1009 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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1010 <cvParam cvRef="MS" accession="MS:1000016" value="1.12925260746667" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
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1011 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
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92ac8e086317
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1013 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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1014 <scanWindow> |
92ac8e086317
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galaxyp
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1015 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1016 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1017 </scanWindow> |
92ac8e086317
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galaxyp
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1018 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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1019 </scan> |
92ac8e086317
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galaxyp
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changeset
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1020 </scanList> |
92ac8e086317
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galaxyp
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1021 <binaryDataArrayList count="2"> |
92ac8e086317
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1022 <binaryDataArray encodedLength="800"> |
92ac8e086317
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1023 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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1024 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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1053 <scanWindow> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1056 </scanWindow> |
92ac8e086317
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galaxyp
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1057 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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1058 </scan> |
92ac8e086317
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galaxyp
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1059 </scanList> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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1122 <cvParam cvRef="MS" accession="MS:1000528" value="403.247863769531" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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1123 <cvParam cvRef="MS" accession="MS:1000527" value="1174.6962890625" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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1124 <scanList count="1"> |
92ac8e086317
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92ac8e086317
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1126 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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1131 <scanWindow> |
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92ac8e086317
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galaxyp
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92ac8e086317
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1134 </scanWindow> |
92ac8e086317
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1135 </scanWindowList> |
92ac8e086317
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1136 </scan> |
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1137 </scanList> |
92ac8e086317
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1138 <binaryDataArrayList count="2"> |
92ac8e086317
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1140 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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1191 </spectrum> |
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1243 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1245 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1247 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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1248 <scanWindow> |
92ac8e086317
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galaxyp
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1249 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1251 </scanWindow> |
92ac8e086317
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galaxyp
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changeset
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1252 </scanWindowList> |
92ac8e086317
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galaxyp
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diff
changeset
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1253 </scan> |
92ac8e086317
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galaxyp
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changeset
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1254 </scanList> |
92ac8e086317
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galaxyp
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changeset
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1255 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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1256 <binaryDataArray encodedLength="424"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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changeset
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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changeset
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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1364 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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1365 <scanWindow> |
92ac8e086317
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galaxyp
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1366 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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1367 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1368 </scanWindow> |
92ac8e086317
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galaxyp
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1369 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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1370 </scan> |
92ac8e086317
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galaxyp
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1371 </scanList> |
92ac8e086317
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galaxyp
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1372 <binaryDataArrayList count="2"> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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1404 <scanWindow> |
92ac8e086317
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92ac8e086317
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1406 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1407 </scanWindow> |
92ac8e086317
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galaxyp
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1408 </scanWindowList> |
92ac8e086317
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galaxyp
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changeset
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1409 </scan> |
92ac8e086317
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galaxyp
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changeset
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1410 </scanList> |
92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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1425 </spectrum> |
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1487 </scan> |
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1488 </scanList> |
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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1565 </scan> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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changeset
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1581 </spectrum> |
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galaxyp
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1582 <spectrum id="controllerType=0 controllerNumber=1 scan=42" index="39" defaultArrayLength="110"> |
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1583 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
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1587 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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1592 <scanList count="1"> |
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92ac8e086317
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92ac8e086317
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galaxyp
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changeset
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1604 </scan> |
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92ac8e086317
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galaxyp
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1641 </scanWindow> |
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1642 </scanWindowList> |
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1643 </scan> |
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changeset
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1644 </scanList> |
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1645 <binaryDataArrayList count="2"> |
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1646 <binaryDataArray encodedLength="300"> |
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92ac8e086317
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1659 </spectrum> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
parents:
diff
changeset
|
1760 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1761 </scanList> |
92ac8e086317
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galaxyp
parents:
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changeset
|
1762 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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changeset
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1763 <binaryDataArray encodedLength="892"> |
92ac8e086317
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galaxyp
parents:
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changeset
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1764 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1765 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1766 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
parents:
diff
changeset
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1768 </binaryDataArray> |
92ac8e086317
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galaxyp
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1769 <binaryDataArray encodedLength="1100"> |
92ac8e086317
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galaxyp
parents:
diff
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1770 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1771 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1772 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
parents:
diff
changeset
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1774 </binaryDataArray> |
92ac8e086317
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galaxyp
parents:
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changeset
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1775 </binaryDataArrayList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1776 </spectrum> |
92ac8e086317
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galaxyp
parents:
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changeset
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92ac8e086317
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galaxyp
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changeset
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1778 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
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galaxyp
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changeset
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1779 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1780 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
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galaxyp
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changeset
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1781 <cvParam cvRef="MS" accession="MS:1000285" value="289890" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1782 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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changeset
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1784 <cvParam cvRef="MS" accession="MS:1000505" value="38952.93359375" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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changeset
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1787 <scanList count="1"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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changeset
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1789 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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changeset
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92ac8e086317
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galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1793 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1794 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1795 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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1796 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1797 </scanWindow> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1798 </scanWindowList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1799 </scan> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1800 </scanList> |
92ac8e086317
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galaxyp
parents:
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changeset
|
1801 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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changeset
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1802 <binaryDataArray encodedLength="596"> |
92ac8e086317
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galaxyp
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changeset
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1803 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
|
1804 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1805 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
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galaxyp
parents:
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changeset
|
1807 </binaryDataArray> |
92ac8e086317
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galaxyp
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1808 <binaryDataArray encodedLength="700"> |
92ac8e086317
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galaxyp
parents:
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changeset
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1809 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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1810 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
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92ac8e086317
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galaxyp
parents:
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92ac8e086317
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92ac8e086317
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92ac8e086317
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1837 </scanWindowList> |
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1838 </scan> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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1867 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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1875 </scanWindow> |
92ac8e086317
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galaxyp
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1876 </scanWindowList> |
92ac8e086317
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galaxyp
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1877 </scan> |
92ac8e086317
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galaxyp
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1878 </scanList> |
92ac8e086317
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galaxyp
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1879 <binaryDataArrayList count="2"> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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1911 <scanWindow> |
92ac8e086317
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galaxyp
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1912 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1913 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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1914 </scanWindow> |
92ac8e086317
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galaxyp
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galaxyp
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changeset
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1916 </scan> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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galaxyp
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1920 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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galaxyp
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92ac8e086317
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galaxyp
parents:
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1922 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
parents:
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1923 <binary>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</binary> |
92ac8e086317
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galaxyp
parents:
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changeset
|
1924 </binaryDataArray> |
92ac8e086317
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galaxyp
parents:
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1925 <binaryDataArray encodedLength="756"> |
92ac8e086317
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galaxyp
parents:
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1926 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
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|
1927 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1928 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
parents:
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92ac8e086317
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galaxyp
parents:
diff
changeset
|
1930 </binaryDataArray> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1931 </binaryDataArrayList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1932 </spectrum> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1933 <spectrum id="controllerType=0 controllerNumber=1 scan=53" index="48" defaultArrayLength="192"> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1934 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1935 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
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galaxyp
parents:
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changeset
|
1936 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
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galaxyp
parents:
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changeset
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1937 <cvParam cvRef="MS" accession="MS:1000285" value="881304.625" name="total ion current" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1938 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
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galaxyp
parents:
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changeset
|
1939 <cvParam cvRef="MS" accession="MS:1000504" value="536.163879394531" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1940 <cvParam cvRef="MS" accession="MS:1000505" value="113374.8828125" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1941 <cvParam cvRef="MS" accession="MS:1000528" value="402.319396972656" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1942 <cvParam cvRef="MS" accession="MS:1000527" value="1170.40966796875" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1943 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
|
1944 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1945 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
parents:
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1946 <cvParam cvRef="MS" accession="MS:1000016" value="1.37015649386667" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
|
1947 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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1948 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1949 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1950 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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1951 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1952 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1953 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1954 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1955 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1956 </scanList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1957 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
parents:
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changeset
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1958 <binaryDataArray encodedLength="972"> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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1959 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1960 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1961 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
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galaxyp
parents:
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1963 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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1964 <binaryDataArray encodedLength="1228"> |
92ac8e086317
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galaxyp
parents:
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1965 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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1966 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
1967 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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1968 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1969 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1970 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1971 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1972 <spectrum id="controllerType=0 controllerNumber=1 scan=54" index="49" defaultArrayLength="193"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1973 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1974 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1975 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1976 <cvParam cvRef="MS" accession="MS:1000285" value="662735.375" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1977 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1978 <cvParam cvRef="MS" accession="MS:1000504" value="536.1640625" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1979 <cvParam cvRef="MS" accession="MS:1000505" value="84225.609375" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1980 <cvParam cvRef="MS" accession="MS:1000528" value="401.764404296875" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1981 <cvParam cvRef="MS" accession="MS:1000527" value="1094.96325683594" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1982 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1983 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1984 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1985 <cvParam cvRef="MS" accession="MS:1000016" value="1.38017916853333" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1986 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1987 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1988 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1989 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1990 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1991 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1992 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1993 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1994 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1995 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1996 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1997 <binaryDataArray encodedLength="976"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1998 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
1999 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2000 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2001 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2002 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2003 <binaryDataArray encodedLength="1228"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2004 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2005 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2006 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2007 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2008 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2009 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2010 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2011 <spectrum id="controllerType=0 controllerNumber=1 scan=55" index="50" defaultArrayLength="80"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2012 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2013 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2014 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2015 <cvParam cvRef="MS" accession="MS:1000285" value="204702.9375" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2016 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2017 <cvParam cvRef="MS" accession="MS:1000504" value="536.163879394531" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
2018 <cvParam cvRef="MS" accession="MS:1000505" value="27672.724609375" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2019 <cvParam cvRef="MS" accession="MS:1000528" value="403.304351806641" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2020 <cvParam cvRef="MS" accession="MS:1000527" value="1143.13562011719" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
2021 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2022 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
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galaxyp
parents:
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changeset
|
2023 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
parents:
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changeset
|
2024 <cvParam cvRef="MS" accession="MS:1000016" value="1.39019163545" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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changeset
|
2025 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
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galaxyp
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changeset
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2026 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
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galaxyp
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changeset
|
2027 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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changeset
|
2028 <scanWindow> |
92ac8e086317
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galaxyp
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changeset
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2029 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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2030 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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diff
changeset
|
2031 </scanWindow> |
92ac8e086317
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galaxyp
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diff
changeset
|
2032 </scanWindowList> |
92ac8e086317
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galaxyp
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diff
changeset
|
2033 </scan> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
2034 </scanList> |
92ac8e086317
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galaxyp
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changeset
|
2035 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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2036 <binaryDataArray encodedLength="484"> |
92ac8e086317
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galaxyp
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2037 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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2038 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
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changeset
|
2039 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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92ac8e086317
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2041 </binaryDataArray> |
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galaxyp
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2043 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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2047 </binaryDataArray> |
92ac8e086317
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galaxyp
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2048 </binaryDataArrayList> |
92ac8e086317
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galaxyp
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changeset
|
2049 </spectrum> |
92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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2055 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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changeset
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2060 <scanList count="1"> |
92ac8e086317
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galaxyp
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2061 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
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galaxyp
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2062 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2064 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
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galaxyp
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2065 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
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galaxyp
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2066 <scanWindowList count="1"> |
92ac8e086317
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galaxyp
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2067 <scanWindow> |
92ac8e086317
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galaxyp
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2068 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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2069 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
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galaxyp
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2070 </scanWindow> |
92ac8e086317
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galaxyp
parents:
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changeset
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2071 </scanWindowList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
2072 </scan> |
92ac8e086317
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galaxyp
parents:
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changeset
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2073 </scanList> |
92ac8e086317
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galaxyp
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changeset
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2074 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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2075 <binaryDataArray encodedLength="1048"> |
92ac8e086317
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galaxyp
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changeset
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2076 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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2077 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
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changeset
|
2078 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
parents:
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2149 </scanWindowList> |
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galaxyp
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2150 </scan> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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2189 </scan> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2228 </scan> |
92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
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92ac8e086317
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2265 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2266 </scanWindowList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
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2267 </scan> |
92ac8e086317
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galaxyp
parents:
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changeset
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2268 </scanList> |
92ac8e086317
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galaxyp
parents:
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changeset
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2269 <binaryDataArrayList count="2"> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2271 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2275 </binaryDataArray> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2277 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
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92ac8e086317
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galaxyp
parents:
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
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galaxyp
parents:
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changeset
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2283 </spectrum> |
92ac8e086317
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galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2285 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2286 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2287 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
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galaxyp
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changeset
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2288 <cvParam cvRef="MS" accession="MS:1000285" value="10471998" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2291 <cvParam cvRef="MS" accession="MS:1000505" value="3295294" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
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2294 <scanList count="1"> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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2304 </scanWindow> |
92ac8e086317
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galaxyp
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2305 </scanWindowList> |
92ac8e086317
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galaxyp
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2306 </scan> |
92ac8e086317
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galaxyp
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2307 </scanList> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2320 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2321 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2322 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2323 <spectrum id="controllerType=0 controllerNumber=1 scan=64" index="58" defaultArrayLength="818"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2324 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2325 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2326 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2327 <cvParam cvRef="MS" accession="MS:1000285" value="17757866" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2328 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2329 <cvParam cvRef="MS" accession="MS:1000504" value="477.203338623047" name="base peak m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2331 <cvParam cvRef="MS" accession="MS:1000528" value="401.978363037109" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2332 <cvParam cvRef="MS" accession="MS:1000527" value="1192.50231933594" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2333 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2334 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2335 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2337 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2338 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2339 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2340 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2341 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2342 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2343 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2344 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2345 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2346 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2347 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2348 <binaryDataArray encodedLength="3580"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2349 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2350 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2351 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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92ac8e086317
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galaxyp
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2353 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2354 <binaryDataArray encodedLength="4880"> |
92ac8e086317
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galaxyp
parents:
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2355 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
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2356 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
diff
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2357 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2359 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2360 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2361 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2363 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2364 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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2365 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2366 <cvParam cvRef="MS" accession="MS:1000285" value="51063420" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2367 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2383 </scanWindowList> |
92ac8e086317
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galaxyp
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2384 </scan> |
92ac8e086317
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galaxyp
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2385 </scanList> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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2423 </scan> |
92ac8e086317
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2424 </scanList> |
92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
parents:
diff
changeset
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2437 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2438 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2439 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2440 <spectrum id="controllerType=0 controllerNumber=1 scan=67" index="61" defaultArrayLength="1026"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2441 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2442 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2443 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2444 <cvParam cvRef="MS" accession="MS:1000285" value="62779524" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2445 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2447 <cvParam cvRef="MS" accession="MS:1000505" value="18132246" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2449 <cvParam cvRef="MS" accession="MS:1000527" value="1194.50073242188" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2450 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2451 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2452 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2454 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2456 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2457 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2458 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2459 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2460 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2461 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2462 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2463 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2464 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2465 <binaryDataArray encodedLength="4544"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2466 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2467 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2468 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2470 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2471 <binaryDataArray encodedLength="6068"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2472 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2473 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2474 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2476 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2477 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2478 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2479 <spectrum id="controllerType=0 controllerNumber=1 scan=79" index="62" defaultArrayLength="1183"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2480 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2481 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2482 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2483 <cvParam cvRef="MS" accession="MS:1000285" value="31874272" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2484 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2488 <cvParam cvRef="MS" accession="MS:1000527" value="1192.50939941406" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2489 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2490 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2491 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2492 <cvParam cvRef="MS" accession="MS:1000016" value="1.52459171678333" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2493 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2494 <cvParam cvRef="MS" accession="MS:1000927" value="120" name="ion injection time" unitAccession="UO:0000028" unitName="millisecond" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2495 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2496 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2497 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2498 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2499 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2500 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2501 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2502 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2503 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2504 <binaryDataArray encodedLength="5144"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
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92ac8e086317
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galaxyp
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2506 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
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galaxyp
parents:
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2507 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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2508 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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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|
2509 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2510 <binaryDataArray encodedLength="7000"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2511 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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2512 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2515 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2516 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2517 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2518 <spectrum id="controllerType=0 controllerNumber=1 scan=88" index="63" defaultArrayLength="757"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2519 <cvParam cvRef="MS" accession="MS:1000511" value="1" name="ms level" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2520 <cvParam cvRef="MS" accession="MS:1000579" value="" name="MS1 spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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2521 <cvParam cvRef="MS" accession="MS:1000130" value="" name="positive scan" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2522 <cvParam cvRef="MS" accession="MS:1000285" value="11898879" name="total ion current" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2523 <cvParam cvRef="MS" accession="MS:1000127" value="" name="centroid spectrum" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2525 <cvParam cvRef="MS" accession="MS:1000505" value="3632126" name="base peak intensity" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2526 <cvParam cvRef="MS" accession="MS:1000528" value="402.321258544922" name="lowest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2527 <cvParam cvRef="MS" accession="MS:1000527" value="1179.78564453125" name="highest observed m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2528 <scanList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2529 <cvParam cvRef="MS" accession="MS:1000795" value="" name="no combination" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2530 <scan instrumentConfigurationRef="IC1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
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2531 <cvParam cvRef="MS" accession="MS:1000016" value="1.54722693971667" name="scan start time" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2532 <cvParam cvRef="MS" accession="MS:1000512" value="FTMS + c NSI Full ms [400.0000-1200.0000]" name="filter string" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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diff
changeset
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2534 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2535 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2536 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
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92ac8e086317
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galaxyp
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2538 </scanWindow> |
92ac8e086317
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galaxyp
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2539 </scanWindowList> |
92ac8e086317
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galaxyp
parents:
diff
changeset
|
2540 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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2541 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
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changeset
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2542 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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92ac8e086317
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galaxyp
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2544 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
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changeset
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2545 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2546 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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2548 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
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2549 <binaryDataArray encodedLength="4508"> |
92ac8e086317
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galaxyp
parents:
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2550 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
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galaxyp
parents:
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changeset
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2551 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
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2552 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
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galaxyp
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2554 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2555 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2556 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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2579 </scan> |
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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galaxyp
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92ac8e086317
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galaxyp
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2618 </scan> |
92ac8e086317
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galaxyp
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2619 </scanList> |
92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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galaxyp
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92ac8e086317
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92ac8e086317
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|
2651 <scanWindowList count="1"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2652 <scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2653 <cvParam cvRef="MS" accession="MS:1000501" value="400" name="scan window lower limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2654 <cvParam cvRef="MS" accession="MS:1000500" value="1200" name="scan window upper limit" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2655 </scanWindow> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2656 </scanWindowList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2657 </scan> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2658 </scanList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2659 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2660 <binaryDataArray encodedLength="1280"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2661 <cvParam cvRef="MS" accession="MS:1000514" value="" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2662 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2663 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
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92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2665 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2666 <binaryDataArray encodedLength="1592"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2667 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2668 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2669 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2670 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2671 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2672 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2673 </spectrum> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2674 </spectrumList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2675 <chromatogramList count="1" defaultDataProcessingRef="ThermoRawFileParserProcessing"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2676 <chromatogram id="BasePeak_0" index="0" defaultArrayLength="101"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2677 <cvParam cvRef="MS" accession="MS:1000628" value="" name="basepeak chromatogram" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2678 <binaryDataArrayList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2679 <binaryDataArray encodedLength="1092"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2680 <cvParam cvRef="MS" accession="MS:1000595" value="" name="time array" unitAccession="UO:0000031" unitName="minute" unitCvRef="UO" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2681 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2682 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2683 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2684 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2685 <binaryDataArray encodedLength="704"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2686 <cvParam cvRef="MS" accession="MS:1000515" value="" name="intensity array" unitAccession="MS:1000131" unitName="number of counts" unitCvRef="MS" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2687 <cvParam cvRef="MS" accession="MS:1000523" value="" name="64-bit float" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2688 <cvParam cvRef="MS" accession="MS:1000574" value="" name="zlib compression" /> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2689 <binary>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</binary> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2690 </binaryDataArray> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2691 </binaryDataArrayList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2692 </chromatogram> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2693 </chromatogramList> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2694 </run> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2695 </mzML> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2696 <indexList count="2"> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2697 <index name="spectrum"> |
10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2698 <offset idRef="controllerType=0 controllerNumber=1 scan=1">3680</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2699 <offset idRef="controllerType=0 controllerNumber=1 scan=2">8638</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2700 <offset idRef="controllerType=0 controllerNumber=1 scan=3">13470</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2701 <offset idRef="controllerType=0 controllerNumber=1 scan=4">18165</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2702 <offset idRef="controllerType=0 controllerNumber=1 scan=5">23275</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2703 <offset idRef="controllerType=0 controllerNumber=1 scan=6">27236</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2704 <offset idRef="controllerType=0 controllerNumber=1 scan=7">31849</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2705 <offset idRef="controllerType=0 controllerNumber=1 scan=8">36725</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2706 <offset idRef="controllerType=0 controllerNumber=1 scan=9">41067</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2707 <offset idRef="controllerType=0 controllerNumber=1 scan=10">45377</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2708 <offset idRef="controllerType=0 controllerNumber=1 scan=11">50593</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2709 <offset idRef="controllerType=0 controllerNumber=1 scan=12">55747</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2710 <offset idRef="controllerType=0 controllerNumber=1 scan=13">60215</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2711 <offset idRef="controllerType=0 controllerNumber=1 scan=14">64618</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2712 <offset idRef="controllerType=0 controllerNumber=1 scan=15">68778</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2713 <offset idRef="controllerType=0 controllerNumber=1 scan=16">73504</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2714 <offset idRef="controllerType=0 controllerNumber=1 scan=17">78052</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2715 <offset idRef="controllerType=0 controllerNumber=1 scan=18">82854</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2716 <offset idRef="controllerType=0 controllerNumber=1 scan=19">87446</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2717 <offset idRef="controllerType=0 controllerNumber=1 scan=20">91807</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2718 <offset idRef="controllerType=0 controllerNumber=1 scan=21">96591</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2719 <offset idRef="controllerType=0 controllerNumber=1 scan=22">100668</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2720 <offset idRef="controllerType=0 controllerNumber=1 scan=23">104729</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2721 <offset idRef="controllerType=0 controllerNumber=1 scan=24">108885</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2722 <offset idRef="controllerType=0 controllerNumber=1 scan=25">113860</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2723 <offset idRef="controllerType=0 controllerNumber=1 scan=26">118991</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2724 <offset idRef="controllerType=0 controllerNumber=1 scan=27">123304</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2725 <offset idRef="controllerType=0 controllerNumber=1 scan=28">127342</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2726 <offset idRef="controllerType=0 controllerNumber=1 scan=29">132138</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2727 <offset idRef="controllerType=0 controllerNumber=1 scan=30">136192</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2728 <offset idRef="controllerType=0 controllerNumber=1 scan=31">140294</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2729 <offset idRef="controllerType=0 controllerNumber=1 scan=32">144559</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2730 <offset idRef="controllerType=0 controllerNumber=1 scan=33">149090</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2731 <offset idRef="controllerType=0 controllerNumber=1 scan=34">153463</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2732 <offset idRef="controllerType=0 controllerNumber=1 scan=35">158870</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2733 <offset idRef="controllerType=0 controllerNumber=1 scan=37">163704</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2734 <offset idRef="controllerType=0 controllerNumber=1 scan=39">168004</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2735 <offset idRef="controllerType=0 controllerNumber=1 scan=40">172608</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2736 <offset idRef="controllerType=0 controllerNumber=1 scan=41">177642</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2737 <offset idRef="controllerType=0 controllerNumber=1 scan=42">182768</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2738 <offset idRef="controllerType=0 controllerNumber=1 scan=43">187467</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2739 <offset idRef="controllerType=0 controllerNumber=1 scan=44">191436</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2740 <offset idRef="controllerType=0 controllerNumber=1 scan=45">195870</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2741 <offset idRef="controllerType=0 controllerNumber=1 scan=46">200672</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2742 <offset idRef="controllerType=0 controllerNumber=1 scan=47">206011</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2743 <offset idRef="controllerType=0 controllerNumber=1 scan=50">210647</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2744 <offset idRef="controllerType=0 controllerNumber=1 scan=51">216058</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2745 <offset idRef="controllerType=0 controllerNumber=1 scan=52">221276</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2746 <offset idRef="controllerType=0 controllerNumber=1 scan=53">226017</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2747 <offset idRef="controllerType=0 controllerNumber=1 scan=54">231567</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2748 <offset idRef="controllerType=0 controllerNumber=1 scan=55">237114</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2749 <offset idRef="controllerType=0 controllerNumber=1 scan=56">241501</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2750 <offset idRef="controllerType=0 controllerNumber=1 scan=57">247221</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2751 <offset idRef="controllerType=0 controllerNumber=1 scan=58">252718</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2752 <offset idRef="controllerType=0 controllerNumber=1 scan=59">257835</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2753 <offset idRef="controllerType=0 controllerNumber=1 scan=60">263534</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2754 <offset idRef="controllerType=0 controllerNumber=1 scan=61">272252</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2755 <offset idRef="controllerType=0 controllerNumber=1 scan=63">281997</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2756 <offset idRef="controllerType=0 controllerNumber=1 scan=64">293023</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2757 <offset idRef="controllerType=0 controllerNumber=1 scan=65">304825</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2758 <offset idRef="controllerType=0 controllerNumber=1 scan=66">312583</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2759 <offset idRef="controllerType=0 controllerNumber=1 scan=67">324901</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2760 <offset idRef="controllerType=0 controllerNumber=1 scan=79">338860</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
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changeset
|
2761 <offset idRef="controllerType=0 controllerNumber=1 scan=88">354346</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2762 <offset idRef="controllerType=0 controllerNumber=1 scan=99">365556</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2763 <offset idRef="controllerType=0 controllerNumber=1 scan=100">371876</offset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2764 <offset idRef="controllerType=0 controllerNumber=1 scan=101">379207</offset> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2765 </index> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2766 <index name="chromatogram"> |
10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2767 <offset idRef="BasePeak_0">385537</offset> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2768 </index> |
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2769 </indexList> |
10
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2770 <indexListOffset>388541</indexListOffset> |
b9b385097f13
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
galaxyp
parents:
9
diff
changeset
|
2771 <fileChecksum>d17fa5e67c8f89705eec985e7029ba040ec4ff8c</fileChecksum> |
9
92ac8e086317
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 9bb883e027809047684fd6c45e9a6f1f3bf69351"
galaxyp
parents:
diff
changeset
|
2772 </indexedmzML> |