Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

annotate test-data/bandage/bandage_info.txt @ 9:30dfa6dcfffe draft default tip

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planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit 4029d59533f63a6f75a6096e496f48baf7018698
author ifb-elixirfr
date Thu, 28 Mar 2024 13:09:51 +0000
parents eb95c9ca5c60
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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1 Node count: 222
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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2 Edge count: 299
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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3 Smallest edge overlap (bp): 127
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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4 Largest edge overlap (bp): 127
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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5 Total length (bp): 3042326
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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6 Total length no overlaps (bp): 3014132
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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7 Dead ends: 0
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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8 Percentage dead ends: 0%
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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9 Connected components: 2
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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10 Largest component (bp): 3042198
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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11 Total length orphaned nodes (bp): 3042198
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12 N50 (bp): 79920
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13 Shortest node (bp): 128
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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14 Lower quartile node (bp): 151
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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15 Median node (bp): 256
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16 Upper quartile node (bp): 7566
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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17 Longest node (bp): 239204
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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18 Median depth: 22.997
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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19 Estimated sequence length (bp): 3234717