Mercurial > repos > imgteam > split_labelmap
diff split_labelmap.xml @ 2:7a2e2e3cf836 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/split_labelmaps/ commit c045f067a57e8308308cf6329060c7ccd3fc372f
author | imgteam |
---|---|
date | Thu, 04 Apr 2024 15:26:45 +0000 |
parents | 9db1c22dbe17 |
children | 0e7be7c35f15 |
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--- a/split_labelmap.xml Mon Nov 13 22:12:26 2023 +0000 +++ b/split_labelmap.xml Thu Apr 04 15:26:45 2024 +0000 @@ -1,5 +1,12 @@ <tool id="ip_split_labelmap" name="Split label map using morphological operators" version="0.2-2"> <description></description> + <macros> + <import>creators.xml</import> + <import>tests.xml</import> + </macros> + <creator> + <expand macro="creators/bmcv"/> + </creator> <edam_operations> <edam_operation>operation_3443</edam_operation> </edam_operations> @@ -25,14 +32,16 @@ <tests> <test> <param name="input" value="sample_seg.tif"/> - <output name="output" value="out.tif" ftype="tiff" compare="sim_size"/> + <expand macro="tests/label_image_diff" name="output" value="out.tif" ftype="tiff"/> </test> </tests> <help> - **What it does** + + **Splits label map using morphological operators.** - Takes a labeled image and outputs a similar file where the labeled parts - of the image that touch (or overlap) are separated by at least 1 pixel (at most 2). + Takes a labeled image and outputs a similar file where the labeled parts + of the image that touch (or overlap) are separated by at least 1 pixel (at most 2 pixels). + </help> <citations> <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>