Mercurial > repos > iracooke > protk_blast

diff tool_dependencies.xml @ 0:88ada6a29993

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Uploaded
author iracooke
date Mon, 04 Mar 2013 04:18:28 -0500
parents
children 0d86d29aaed6
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Mar 04 04:18:28 2013 -0500
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="blast" version="2.2.27">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
+                <action type="shell_command">sh install_blast.sh $INSTALL_DIR 1.1.9</action>
+                <action type="move_file">
+                    <source>install_blast.sh</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PROTK_BLAST_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+            Installs OMSSA via the protk installer
+        </readme>
+    </package>
+
+</tool_dependency>
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