Mercurial > repos > iuc > bamtools_split_tag
changeset 2:e30af4e78cd3 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/bamtools/bamtools_split commit 862f05b5053f55def8007194a702019418697cb5
| author | iuc |
|---|---|
| date | Fri, 13 Jan 2023 12:17:57 +0000 |
| parents | 45f0ce0a9f63 |
| children | e9b9c489aacc |
| files | bamtools_split_tag.xml macros.xml test-data/bamtools-split-test1.bam |
| diffstat | 3 files changed, 6 insertions(+), 13 deletions(-) [+] |
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--- a/bamtools_split_tag.xml Wed Jan 11 13:37:55 2023 +0000 +++ b/bamtools_split_tag.xml Fri Jan 13 12:17:57 2023 +0000 @@ -1,5 +1,5 @@ -<tool id="bamtools_split_tag" name="Split BAM by Tag" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> - <description>into dataset list collection</description> +<tool id="bamtools_split_tag" name="Split BAM by read tag value" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> + <description>into a dataset list collection</description> <macros> <import>macros.xml</import> </macros> @@ -37,15 +37,7 @@ <help> **What is does** -BAMTools split is a utility for splitting BAM files. It is based on BAMtools suite of tools by Derek Barnett (https://github.com/pezmaster31/bamtools). - ------ - -.. class:: warningmark - -**DANGER: Multiple Outputs** - -As described below, splitting a BAM dataset(s) on tag value can produce very large numbers of outputs. Read below and know what you are doing. +BAMTools split is a utility for splitting BAM files. It is based on the BAMtools suite of tools by Derek Barnett (https://github.com/pezmaster31/bamtools). ----- @@ -53,8 +45,9 @@ Split alignments by tag name into a dataset list collection. -This can generate a huge number of output datasets depending on the number of distinct values of the TAG. +.. class:: warningmark +This can generate a collection with a huge number of elements depending on the number of distinct values of the TAG. -----
--- a/macros.xml Wed Jan 11 13:37:55 2023 +0000 +++ b/macros.xml Fri Jan 13 12:17:57 2023 +0000 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <macros> <token name="@TOOL_VERSION@">2.5.2</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">bamtools</requirement>