Mercurial > repos > iuc > busco

annotate test-data/genome_results_metaeuk_auto/short_summary @ 16:bb935709506a draft

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planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
author iuc
date Thu, 12 Jan 2023 13:28:58 +0000
parents e4bd1e99bacf
children 2a5b8b9936bf
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bb935709506a planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
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1 # BUSCO version is: 5.4.4
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2 # The lineage dataset is: eukaryota_odb10 (Creation date: 2020-09-10, number of genomes: 70, number of BUSCOs: 255)
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3 # Summarized benchmarking in BUSCO notation for file /tmp/tmprqvmp912/files/000/dataset_34.dat
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4 # BUSCO was run in mode: euk_genome_met
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5 # Gene predictor used: metaeuk
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7 ***** Results: *****
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9 C:0.4%[S:0.4%,D:0.0%],F:0.0%,M:99.6%,n:255
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10 1 Complete BUSCOs (C)
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11 1 Complete and single-copy BUSCOs (S)
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12 0 Complete and duplicated BUSCOs (D)
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13 0 Fragmented BUSCOs (F)
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14 254 Missing BUSCOs (M)
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15 255 Total BUSCO groups searched
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17 Assembly Statistics:
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18 1 Number of scaffolds
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19 1 Number of contigs
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20 62370 Total length
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21 0.000% Percent gaps
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22 62 KB Scaffold N50
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23 62 KB Contigs N50
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26 Dependencies and versions:
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27 hmmsearch: 3.1
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28 bbtools: 39.01
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29 prodigal: 2.6.3
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30 busco: 5.4.4
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31 metaeuk: 6.a5d39d9