Mercurial > repos > iuc > busco

annotate test-data/genome_results/short_summary @ 17:e824f5d958d0 draft

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planemo upload commit 4b9a335c08b5d42b4297e641a28ff34b045810c3
author iuc
date Thu, 02 Mar 2023 17:02:45 +0000
parents bb935709506a
children 2a5b8b9936bf
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1 # BUSCO version is: 5.4.4
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2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
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3 # Summarized benchmarking in BUSCO notation for file /tmp/tmprqvmp912/files/000/dataset_22.dat
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4 # BUSCO was run in mode: euk_genome_aug
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5 # Gene predictor used: augustus
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7 ***** Results: *****
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9 C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013
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10 1 Complete BUSCOs (C)
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11 1 Complete and single-copy BUSCOs (S)
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12 0 Complete and duplicated BUSCOs (D)
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13 0 Fragmented BUSCOs (F)
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14 1012 Missing BUSCOs (M)
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15 1013 Total BUSCO groups searched
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17 Assembly Statistics:
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18 1 Number of scaffolds
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19 1 Number of contigs
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20 62370 Total length
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21 0.000% Percent gaps
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22 62 KB Scaffold N50
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23 62 KB Contigs N50
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26 Dependencies and versions:
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27 hmmsearch: 3.1
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28 bbtools: 39.01
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29 makeblastdb: 2.13.0+
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30 tblastn: 2.13.0+
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31 augustus: 3.5.0
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32 gff2gbSmallDNA.pl: None
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33 new_species.pl: None
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34 etraining: None
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35 busco: 5.4.4