Mercurial > repos > iuc > busco

annotate test-data/transcriptome_results/short_summary @ 20:ea8146ee148f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
author iuc
date Mon, 18 Mar 2024 16:01:49 +0000
parents 2a5b8b9936bf
children 2babe6d5c561
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ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
diff changeset
1 # BUSCO version is: 5\.5\.0
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
diff changeset
2 # The lineage dataset is: arthropoda_odb10 \(Creation date: [0-9]{4}-[0-9]{2}-[0-9]{2}, number of genomes: 90, number of BUSCOs: 1013\)
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
diff changeset
3 # Summarized benchmarking in BUSCO notation for file [a-z0-9_\-/\.]+
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bb935709506a planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
iuc
parents: 10
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4 # BUSCO was run in mode: euk_tran
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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6 \*\*\*\*\* Results: \*\*\*\*\*
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5e3543b1ef9f planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
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ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
diff changeset
8 C:0\.1%\[S:0\.1%,D:0\.0%\],F:0\.0%,M:99\.9%,n:1013
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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9 1 Complete BUSCOs \(C\)
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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10 1 Complete and single-copy BUSCOs \(S\)
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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11 0 Complete and duplicated BUSCOs \(D\)
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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12 0 Fragmented BUSCOs \(F\)
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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13 1012 Missing BUSCOs \(M\)
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4048d82f0c88 "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
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14 1013 Total BUSCO groups searched
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2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
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2dd755c1c6ff "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 9
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16 Dependencies and versions:
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ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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17 hmmsearch: [0-9\.\+]+
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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18 metaeuk: [0-9a-z\.\+]+
ea8146ee148f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
iuc
parents: 19
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19 busco: [0-9\.\+]+