annotate macros.xml @ 1:c58c1a99578b draft

planemo upload for repository https://github.com/paulzierep/DeepMicro commit 19cd7fd52900e23704975869cd66d5f7b219ae3e
author iuc
date Sat, 10 Jun 2023 21:59:04 +0000
parents 77cbfe3e1b0d
children 2d20b3a1babd
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77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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1 <?xml version="1.0"?>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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2 <macros>
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3 <token name="@TOOL_VERSION@">1.4</token>
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c58c1a99578b planemo upload for repository https://github.com/paulzierep/DeepMicro commit 19cd7fd52900e23704975869cd66d5f7b219ae3e
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4 <token name="@VERSION_SUFFIX@">1</token>
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77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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5 <token name="@PROFILE@">22.05</token>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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6 <xml name="biotools">
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7 <xrefs>
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8 <xref type="bio.tools">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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9 DeepMicro
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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10 </xref>
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11 </xrefs>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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12 </xml>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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13 <xml name="requirements">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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14 <requirements>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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15 <requirement type="package" version="@TOOL_VERSION@">deepmicro</requirement>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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16 </requirements>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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17 </xml>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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18 <xml name="version">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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19 <version_command><![CDATA[
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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20 echo "@TOOL_VERSION@"
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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21 ]]></version_command>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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22 </xml>
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23 <xml name="citations">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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24 <citations>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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25 <citation type="doi">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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26 10.1038/s41598-020-63159-5
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27 </citation>
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28 </citations>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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29 </xml>
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30 <xml name="creator">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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31 <creator>
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32 <person givenName="Paul" familyName="Zierep" email="zierep@informatik.uni-freiburg.de" />
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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33 </creator>
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34 </xml>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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35 <xml name="dm">
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36 <param name="dm" type="text" value="40" label="Dimensions for deep representation learning" help="Comma-separated dimensions for deep representation learning e.g. [50,30,20]">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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37 <validator type="regex" message="Use only numbers and commas for this input">^(\d+|\,)+$</validator>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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38 </param >
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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39
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40 </xml>
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41 <xml name="clfs">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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42 <param name="classifier" type="select" label="Classifier for the cross validation" help="The classifier used for the cross validation (`all` will create a run for each classifier)">
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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43 <option value="svm">svm</option>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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44 <option value="mlp">mlp</option>
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45 <option value="rf">rf</option>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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46 <option value="all">all</option>
77cbfe3e1b0d planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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47 </param>
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48 </xml>
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49 </macros>