Mercurial > repos > iuc > gtdbtk_classify_wf

diff test-data/226.0-data/skani/create_genome_paths.sh @ 16:28bc8c01b193 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/gtdbtk commit 1fb19cc0b5b0db43fcb899afc97cba727a3d6a8b
author iuc
date Wed, 10 Dec 2025 19:00:09 +0000
parents 53a019316350
children
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--- a/test-data/226.0-data/skani/create_genome_paths.sh	Sun Oct 05 13:29:51 2025 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,12 +0,0 @@
-#!/bin/bash
-
-DATAPATH='database'
-
-
-for f in $DATAPATH/*.gz
-do
-  mkdir --parents database/${f:9:3}/${f:13:3}/${f:16:3}/${f:19:3}/ ; mv $f $_
-  filef="$(basename -- $f)"
-  echo "$filef database/${f:9:3}/${f:13:3}/${f:16:3}/${f:19:3}/ " >> genome_paths.tsv
-  #echo "$filef database/${f:9:3}/${f:13:3}/${f:16:3}/${f:19:3}/ "
-done