changeset 27:8633ea985719 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit 00684bab4c9e740cfa6a39abc444380e6818fd97"
author iuc
date Wed, 09 Jun 2021 07:04:45 +0000
parents 5f2ca10db92a
children 260a5a236b66
files scripts/hyphy_summary.py test-data/summary/ORF6-segment.json test-data/summary/ORF6-site.json test-data/summary/ORF6.FADE.json test-data/summary/ORF6.MEME-full.json test-data/summary/ORF6.SLAC.json test-data/summary/ORF6.combined.fas test-data/summary/ORF6.labels.json test-data/summary/merged-segment.json test-data/summary/merged-site.json test-data/summary/nsp7-segment.json test-data/summary/nsp7-site.json test-data/summary/nsp7.FADE.json test-data/summary/nsp7.MEME-full.json test-data/summary/nsp7.SLAC.json test-data/summary/nsp7.combined.fas test-data/summary/nsp7.labels.json test-data/summary/nsp8-segment.json test-data/summary/nsp8-site.json test-data/summary/nsp8.BUSTED.json test-data/summary/nsp8.CFEL.json test-data/summary/nsp8.FADE.json test-data/summary/nsp8.FEL.json test-data/summary/nsp8.MEME-full.json test-data/summary/nsp8.MEME.json test-data/summary/nsp8.PRIME.json test-data/summary/nsp8.RELAX.json test-data/summary/nsp8.SLAC.json test-data/summary/nsp8.combined.fas test-data/summary/nsp8.combined.fas.BGM.json test-data/summary/nsp8.labels.json
diffstat 31 files changed, 36664 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/scripts/hyphy_summary.py	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,668 @@
+import argparse
+import json
+import re
+from collections import defaultdict
+
+import BioExt
+from Bio import SeqIO
+from Bio.Seq import Seq
+from Bio.SeqRecord import SeqRecord
+from BioExt.uds import _align_par
+
+
+class HyPhySummary(object):
+
+    def __init__(self, arguments, summary_json=None, annotation_json=None):
+        self.arguments = arguments
+        self.ref_map = ''
+        self.summary_json = {}
+        self.annotation_json = {}
+        self.include_in_annotation = {}
+        self.test_map = {}
+        self.site_reports = {}
+        self.labels = {}
+        self.ref_seq_map = []
+        self.cfel = {}
+        self.relax = {}
+        self.busted = {}
+        self.slac = {}
+        self.fel = {}
+        self.meme = {}
+        self.meme_full = {}
+        self.prime = {}
+        self.fade = {}
+        self.bgm = {}
+        self.ref_genes = [
+            ['genome', 'ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCTTCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTAGGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAAAACTGGAACACTAAACATAGCAGTGGTGTTACCCGTGAACTCATGCGTGAGCTTAACGGAGGGGCATACACTCGCTATGTCGATAACAACTTCTGTGGCCCTGATGGCTACCCTCTTGAGTGCATTAAAGACCTTCTAGCACGTGCTGGTAAAGCTTCATGCACTTTGTCCGAACAACTGGACTTTATTGACACTAAGAGGGGTGTATACTGCTGCCGTGAACATGAGCATGAAATTGCTTGGTACACGGAACGTTCTGAAAAGAGCTATGAATTGCAGACACCTTTTGAAATTAAATTGGCAAAGAAATTTGACACCTTCAATGGGGAATGTCCAAATTTTGTATTTCCCTTAAATTCCATAATCAAGACTATTCAACCAAGGGTTGAAAAGAAAAAGCTTGATGGCTTTATGGGTAGAATTCGATCTGTCTATCCAGTTGCGTCACCAAATGAATGCAACCAAATGTGCCTTTCAACTCTCATGAAGTGTGATCATTGTGGTGAAACTTCATGGCAGACGGGCGATTTTGTTAAAGCCACTTGCGAATTTTGTGGCACTGAGAATTTGACTAAAGAAGGTGCCACTACTTGTGGTTACTTACCCCAAAATGCTGTTGTTAAAATTTATTGTCCAGCATGTCACAATTCAGAAGTAGGACCTGAGCATAGTCTTGCCGAATACCATAATGAATCTGGCTTGAAAACCATTCTTCGTAAGGGTGGTCGCACTATTGCCTTTGGAGGCTGTGTGTTCTCTTATGTTGGTTGCCATAACAAGTGTGCCTATTGGGTTCCACGTGCTAGCGCTAACATAGGTTGTAACCATACAGGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACAACCTTCTTGAAATACTCCAAAAAGAGAAAGTCAACATCAATATTGTTGGTGACTTTAAACTTAATGAAGAGATCGCCATTATTTTGGCATCTTTTTCTGCTTCCACAAGTGCTTTTGTGGAAACTGTGAAAGGTTTGGATTATAAAGCATTCAAACAAATTGTTGAATCCTGTGGTAATTTTAAAGTTACAAAAGGAAAAGCTAAAAAAGGTGCCTGGAATATTGGTGAACAGAAATCAATACTGAGTCCTCTTTATGCATTTGCATCAGAGGCTGCTCGTGTTGTACGATCAATTTTCTCCCGCACTCTTGAAACTGCTCAAAATTCTGTGCGTGTTTTACAGAAGGCCGCTATAACAATACTAGATGGAATTTCACAGTATTCACTGAGACTCATTGATGCTATGATGTTCACATCTGATTTGGCTACTAACAATCTAGTTGTAATGGCCTACATTACAGGTGGTGTTGTTCAGTTGACTTCGCAGTGGCTAACTAACATCTTTGGCACTGTTTATGAAAAACTCAAACCCGTCCTTGATTGGCTTGAAGAGAAGTTTAAGGAAGGTGTAGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTGCTTGTGAAATTGTCGGTGGACAAATTGTCACCTGTGCAAAGGAAATTAAGGAGAGTGTTCAGACATTCTTTAAGCTTGTAAATAAATTTTTGGCTTTGTGTGCTGACTCTATCATTATTGGTGGAGCTAAACTTAAAGCCTTGAATTTAGGTGAAACATTTGTCACGCACTCAAAGGGATTGTACAGAAAGTGTGTTAAATCCAGAGAAGAAACTGGCCTACTCATGCCTCTAAAAGCCCCAAAAGAAATTATCTTCTTAGAGGGAGAAACACTTCCCACAGAAGTGTTAACAGAGGAAGTTGTCTTGAAAACTGGTGATTTACAACCATTAGAACAACCTACTAGTGAAGCTGTTGAAGCTCCATTGGTTGGTACACCAGTTTGTATTAACGGGCTTATGTTGCTCGAAATCAAAGACACAGAAAAGTACTGTGCCCTTGCACCTAATATGATGGTAACAAACAATACCTTCACACTCAAAGGCGGTGCACCAACAAAGGTTACTTTTGGTGATGACACTGTGATAGAAGTGCAAGGTTACAAGAGTGTGAATATCACTTTTGAACTTGATGAAAGGATTGATAAAGTACTTAATGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAAATGAGTTCGCCTGTGTTGTGGCAGATGCTGTCATAAAAACTTTGCAACCAGTATCTGAATTACTTACACCACTGGGCATTGATTTAGATGAGTGGAGTATGGCTACATACTACTTATTTGATGAGTCTGGTGAGTTTAAATTGGCTTCACATATGTATTGTTCTTTCTACCCTCCAGATGAGGATGAAGAAGAAGGTGATTGTGAAGAAGAAGAGTTTGAGCCATCAACTCAATATGAGTATGGTACTGAAGATGATTACCAAGGTAAACCTTTGGAATTTGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAGAAGATTGGTTAGATGATGATAGTCAACAAACTGTTGGTCAACAAGACGGCAGTGAGGACAATCAGACAACTACTATTCAAACAATTGTTGAGGTTCAACCTCAATTAGAGATGGAACTTACACCAGTTGTTCAGACTATTGAAGTGAATAGTTTTAGTGGTTATTTAAAACTTACTGACAATGTATACATTAAAAATGCAGACATTGTGGAAGAAGCTAAAAAGGTAAAACCAACAGTGGTTGTTAATGCAGCCAATGTTTACCTTAAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTACTAACAATGCCATGCAAGTTGAATCTGATGATTACATAGCTACTAATGGACCACTTAAAGTGGGTGGTAGTTGTGTTTTAAGCGGACACAATCTTGCTAAACACTGTCTTCATGTTGTCGGCCCAAATGTTAACAAAGGTGAAGACATTCAACTTCTTAAGAGTGCTTATGAAAATTTTAATCAGCACGAAGTTCTACTTGCACCATTATTATCAGCTGGTATTTTTGGTGCTGACCCTATACATTCTTTAAGAGTTTGTGTAGATACTGTTCGCACAAATGTCTACTTAGCTGTCTTTGATAAAAATCTCTATGACAAACTTGTTTCAAGCTTTTTGGAAATGAAGAGTGAAAAGCAAGTTGAACAAAAGATCGCTGAGATTCCTAAAGAGGAAGTTAAGCCATTTATAACTGAAAGTAAACCTTCAGTTGAACAGAGAAAACAAGATGATAAGAAAATCAAAGCTTGTGTTGAAGAAGTTACAACAACTCTGGAAGAAACTAAGTTCCTCACAGAAAACTTGTTACTTTATATTGACATTAATGGCAATCTTCATCCAGATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAAGAAAGATGCTCCATATATAGTGGGTGATGTTGTTCAAGAGGGTGTTTTAACTGCTGTGGTTATACCTACTAAAAAGGCTGGTGGCACTACTGAAATGCTAGCGAAAGCTTTGAGAAAAGTGCCAACAGACAATTATATAACCACTTACCCGGGTCAGGGTTTAAATGGTTACACTGTAGAGGAGGCAAAGACAGTGCTTAAAAAGTGTAAAAGTGCCTTTTACATTCTACCATCTATTATCTCTAATGAGAAGCAAGAAATTCTTGGAACTGTTTCTTGGAATTTGCGAGAAATGCTTGCACATGCAGAAGAAACACGCAAATTAATGCCTGTCTGTGTGGAAACTAAAGCCATAGTTTCAACTATACAGCGTAAATATAAGGGTATTAAAATACAAGAGGGTGTGGTTGATTATGGTGCTAGATTTTACTTTTACACCAGTAAAACAACTGTAGCGTCACTTATCAACACACTTAACGATCTAAATGAAACTCTTGTTACAATGCCACTTGGCTATGTAACACATGGCTTAAATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTACAGTTTCTGTTTCTTCACCTGATGCTGTTACAGCGTATAATGGTTATCTTACTTCTTCTTCTAAAACACCTGAAGAACATTTTATTGAAACCATCTCACTTGCTGGTTCCTATAAAGATTGGTCCTATTCTGGACAATCTACACAACTAGGTATAGAATTTCTTAAGAGAGGTGATAAAAGTGTATATTACACTAGTAATCCTACCACATTCCACCTAGATGGTGAAGTTATCACCTTTGACAATCTTAAGACACTTCTTTCTTTGAGAGAAGTGAGGACTATTAAGGTGTTTACAACAGTAGACAACATTAACCTCCACACGCAAGTTGTGGACATGTCAATGACATATGGACAACAGTTTGGTCCAACTTATTTGGATGGAGCTGATGTTACTAAAATAAAACCTCATAATTCACATGAAGGTAAAACATTTTATGTTTTACCTAATGATGACACTCTACGTGTTGAGGCTTTTGAGTACTACCACACAACTGATCCTAGTTTTCTGGGTAGGTACATGTCAGCATTAAATCACACTAAAAAGTGGAAATACCCACAAGTTAATGGTTTAACTTCTATTAAATGGGCAGATAACAACTGTTATCTTGCCACTGCATTGTTAACACTCCAACAAATAGAGTTGAAGTTTAATCCACCTGCTCTACAAGATGCTTATTACAGAGCAAGGGCTGGTGAAGCTGCTAACTTTTGTGCACTTATCTTAGCCTACTGTAATAAGACAGTAGGTGAGTTAGGTGATGTTAGAGAAACAATGAGTTACTTGTTTCAACATGCCAATTTAGATTCTTGCAAAAGAGTCTTGAACGTGGTGTGTAAAACTTGTGGACAACAGCAGACAACCCTTAAGGGTGTAGAAGCTGTTATGTACATGGGCACACTTTCTTATGAACAATTTAAGAAAGGTGTTCAGATACCTTGTACGTGTGGTAAACAAGCTACAAAATATCTAGTACAACAGGAGTCACCTTTTGTTATGATGTCAGCACCACCTGCTCAGTATGAACTTAAGCATGGTACATTTACTTGTGCTAGTGAGTACACTGGTAATTACCAGTGTGGTCACTATAAACATATAACTTCTAAAGAAACTTTGTATTGCATAGACGGTGCTTTACTTACAAAGTCCTCAGAATACAAAGGTCCTATTACGGATGTTTTCTACAAAGAAAACAGTTACACAACAACCATAAAACCAGTTACTTATAAATTGGATGGTGTTGTTTGTACAGAAATTGACCCTAAGTTGGACAATTATTATAAGAAAGACAATTCTTATTTCACAGAGCAACCAATTGATCTTGTACCAAACCAACCATATCCAAACGCAAGCTTCGATAATTTTAAGTTTGTATGTGATAATATCAAATTTGCTGATGATTTAAACCAGTTAACTGGTTATAAGAAACCTGCTTCAAGAGAGCTTAAAGTTACATTTTTCCCTGACTTAAATGGTGATGTGGTGGCTATTGATTATAAACACTACACACCCTCTTTTAAGAAAGGAGCTAAATTGTTACATAAACCTATTGTTTGGCATGTTAACAATGCAACTAATAAAGCCACGTATAAACCAAATACCTGGTGTATACGTTGTCTTTGGAGCACAAAACCAGTTGAAACATCAAATTCGTTTGATGTACTGAAGTCAGAGGACGCGCAGGGAATGGATAATCTTGCCTGCGAAGATCTAAAACCAGTCTCTGAAGAAGTAGTGGAAAATCCTACCATACAGAAAGACGTTCTTGAGTGTAATGTGAAAACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTTAAAAATTACAGAAGAGGTTGGCCACACAGATCTAATGGCTGCTTATGTAGACAATTCTAGTCTTACTATTAAGAAACCTAATGAATTATCTAGAGTATTAGGTTTGAAAACCCTTGCTACTCATGGTTTAGCTGCTGTTAATAGTGTCCCTTGGGATACTATAGCTAATTATGCTAAGCCTTTTCTTAACAAAGTTGTTAGTACAACTACTAACATAGTTACACGGTGTTTAAACCGTGTTTGTACTAATTATATGCCTTATTTCTTTACTTTATTGCTACAATTGTGTACTTTTACTAGAAGTACAAATTCTAGAATTAAAGCATCTATGCCGACTACTATAGCAAAGAATACTGTTAAGAGTGTCGGTAAATTTTGTCTAGAGGCTTCATTTAATTATTTGAAGTCACCTAATTTTTCTAAACTGATAAATATTATAATTTGGTTTTTACTATTAAGTGTTTGCCTAGGTTCTTTAATCTACTCAACCGCTGCTTTAGGTGTTTTAATGTCTAATTTAGGCATGCCTTCTTACTGTACTGGTTACAGAGAAGGCTATTTGAACTCTACTAATGTCACTATTGCAACCTACTGTACTGGTTCTATACCTTGTAGTGTTTGTCTTAGTGGTTTAGATTCTTTAGACACCTATCCTTCTTTAGAAACTATACAAATTACCATTTCATCTTTTAAATGGGATTTAACTGCTTTTGGCTTAGTTGCAGAGTGGTTTTTGGCATATATTCTTTTCACTAGGTTTTTCTATGTACTTGGATTGGCTGCAATCATGCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTCTTGGCTTATGTGGTTAATAATTAATCTTGTACAAATGGCCCCGATTTCAGCTATGGTTAGAATGTACATCTTCTTTGCATCATTTTATTATGTATGGAAAAGTTATGTGCATGTTGTAGACGGTTGTAATTCATCAACTTGTATGATGTGTTACAAACGTAATAGAGCAACAAGAGTCGAATGTACAACTATTGTTAATGGTGTTAGAAGGTCCTTTTATGTCTATGCTAATGGAGGTAAAGGCTTTTGCAAACTACACAATTGGAATTGTGTTAATTGTGATACATTCTGTGCTGGTAGTACATTTATTAGTGATGAAGTTGCGAGAGACTTGTCACTACAGTTTAAAAGACCAATAAATCCTACTGACCAGTCTTCTTACATCGTTGATAGTGTTACAGTGAAGAATGGTTCCATCCATCTTTACTTTGATAAAGCTGGTCAAAAGACTTATGAAAGACATTCTCTCTCTCATTTTGTTAACTTAGACAACCTGAGAGCTAATAACACTAAAGGTTCATTGCCTATTAATGTTATAGTTTTTGATGGTAAATCAAAATGTGAAGAATCATCTGCAAAATCAGCGTCTGTTTACTACAGTCAGCTTATGTGTCAACCTATACTGTTACTAGATCAGGCATTAGTGTCTGATGTTGGTGATAGTGCGGAAGTTGCAGTTAAAATGTTTGATGCTTACGTTAATACGTTTTCATCAACTTTTAACGTACCAATGGAAAAACTCAAAACACTAGTTGCAACTGCAGAAGCTGAACTTGCAAAGAATGTGTCCTTAGACAATGTCTTATCTACTTTTATTTCAGCAGCTCGGCAAGGGTTTGTTGATTCAGATGTAGAAACTAAAGATGTTGTTGAATGTCTTAAATTGTCACATCAATCTGACATAGAAGTTACTGGCGATAGTTGTAATAACTATATGCTCACCTATAACAAAGTTGAAAACATGACACCCCGTGACCTTGGTGCTTGTATTGACTGTAGTGCGCGTCATATTAATGCGCAGGTAGCAAAAAGTCACAACATTGCTTTGATATGGAACGTTAAAGATTTCATGTCATTGTCTGAACAACTACGAAAACAAATACGTAGTGCTGCTAAAAAGAATAACTTACCTTTTAAGTTGACATGTGCAACTACTAGACAAGTTGTTAATGTTGTAACAACAAAGATAGCACTTAAGGGTGGTAAAATTGTTAATAATTGGTTGAAGCAGTTAATTAAAGTTACACTTGTGTTCCTTTTTGTTGCTGCTATTTTCTATTTAATAACACCTGTTCATGTCATGTCTAAACATACTGACTTTTCAAGTGAAATCATAGGATACAAGGCTATTGATGGTGGTGTCACTCGTGACATAGCATCTACAGATACTTGTTTTGCTAACAAACATGCTGATTTTGACACATGGTTTAGCCAGCGTGGTGGTAGTTATACTAATGACAAAGCTTGCCCATTGATTGCTGCAGTCATAACAAGAGAAGTGGGTTTTGTCGTGCCTGGTTTGCCTGGCACGATATTACGCACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCAGTTGGTAACATCTGTTACACACCATCAAAACTTATAGAGTACACTGACTTTGCAACATCAGCTTGTGTTTTGGCTGCTGAATGTACAATTTTTAAAGATGCTTCTGGTAAGCCAGTACCATATTGTTATGATACCAATGTACTAGAAGGTTCTGTTGCTTATGAAAGTTTACGCCCTGACACACGTTATGTGCTCATGGATGGCTCTATTATTCAATTTCCTAACACCTACCTTGAAGGTTCTGTTAGAGTGGTAACAACTTTTGATTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATCAGAAGCTGGTGTTTGTGTATCTACTAGTGGTAGATGGGTACTTAACAATGATTATTACAGATCTTTACCAGGAGTTTTCTGTGGTGTAGATGCTGTAAATTTACTTACTAATATGTTTACACCACTAATTCAACCTATTGGTGCTTTGGACATATCAGCATCTATAGTAGCTGGTGGTATTGTAGCTATCGTAGTAACATGCCTTGCCTACTATTTTATGAGGTTTAGAAGAGCTTTTGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTCCTTATGTCATTCACTGTACTCTGTTTAACACCAGTTTACTCATTCTTACCTGGTGTTTATTCTGTTATTTACTTGTACTTGACATTTTATCTTACTAATGATGTTTCTTTTTTAGCACATATTCAGTGGATGGTTATGTTCACACCTTTAGTACCTTTCTGGATAACAATTGCTTATATCATTTGTATTTCCACAAAGCATTTCTATTGGTTCTTTAGTAATTACCTAAAGAGACGTGTAGTCTTTAATGGTGTTTCCTTTAGTACTTTTGAAGAAGCTGCGCTGTGCACCTTTTTGTTAAATAAAGAAATGTATCTAAAGTTGCGTAGTGATGTGCTATTACCTCTTACGCAATATAATAGATACTTAGCTCTTTATAATAAGTACAAGTATTTTAGTGGAGCAATGGATACAACTAGCTACAGAGAAGCTGCTTGTTGTCATCTCGCAAAGGCTCTCAATGACTTCAGTAACTCAGGTTCTGATGTTCTTTACCAACCACCACAAACCTCTATCACCTCAGCTGTTTTGCAGAGTGGTTTTAGAAAAATGGCATTCCCATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACAACTACACTTAACGGTCTTTGGCTTGATGACGTAGTTTACTGTCCAAGACATGTGATCTGCACCTCTGAAGACATGCTTAACCCTAATTATGAAGATTTACTCATTCGTAAGTCTAATCATAATTTCTTGGTACAGGCTGGTAATGTTCAACTCAGGGTTATTGGACATTCTATGCAAAATTGTGTACTTAAGCTTAAGGTTGATACAGCCAATCCTAAGACACCTAAGTATAAGTTTGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATGGTTCACCATCTGGTGTTTACCAATGTGCTATGAGGCCCAATTTCACTATTAAGGGTTCATTCCTTAATGGTTCATGTGGTAGTGTTGGTTTTAACATAGATTATGACTGTGTCTCTTTTTGTTACATGCACCATATGGAATTACCAACTGGAGTTCATGCTGGCACAGACTTAGAAGGTAACTTTTATGGACCTTTTGTTGACAGGCAAACAGCACAAGCAGCTGGTACGGACACAACTATTACAGTTAATGTTTTAGCTTGGTTGTACGCTGCTGTTATAAATGGAGACAGGTGGTTTCTCAATCGATTTACCACAACTCTTAATGACTTTAACCTTGTGGCTATGAAGTACAATTATGAACCTCTAACACAAGACCATGTTGACATACTAGGACCTCTTTCTGCTCAAACTGGAATTGCCGTTTTAGATATGTGTGCTTCATTAAAAGAATTACTGCAAAATGGTATGAATGGACGTACCATATTGGGTAGTGCTTTATTAGAAGATGAATTTACACCTTTTGATGTTGTTAGACAATGCTCAGGTGTTACTTTCCAAAGTGCAGTGAAAAGAACAATCAAGGGTACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGTCCAGAGTACTCAATGGTCTTTGTTCTTTTTTTTGTATGAAAATGCCTTTTTACCTTTTGCTATGGGTATTATTGCTATGTCTGCTTTTGCAATGATGTTTGTCAAACATAAGCATGCATTTCTCTGTTTGTTTTTGTTACCTTCTCTTGCCACTGTAGCTTATTTTAATATGGTCTATATGCCTGCTAGTTGGGTGATGCGTATTATGACATGGTTGGATATGGTTGATACTAGTTTGTCTGGTTTTAAGCTAAAAGACTGTGTTATGTATGCATCAGCTGTAGTGTTACTAATCCTTATGACAGCAAGAACTGTGTATGATGATGGTGCTAGGAGAGTGTGGACACTTATGAATGTCTTGACACTCGTTTATAAAGTTTATTATGGTAATGCTTTAGATCAAGCCATTTCCATGTGGGCTCTTATAATCTCTGTTACTTCTAACTACTCAGGTGTAGTTACAACTGTCATGTTTTTGGCCAGAGGTATTGTTTTTATGTGTGTTGAGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATGCTAGTTTATTGTTTCTTAGGCTATTTTTGTACTTGTTACTTTGGCCTCTTTTGTTTACTCAACCGCTACTTTAGACTGACTCTTGGTGTTTATGATTACTTAGTTTCTACACAGGAGTTTAGATATATGAATTCACAGGGACTACTCCCACCCAAGAATAGCATAGATGCCTTCAAACTCAACATTAAATTGTTGGGTGTTGGTGGCAAACCTTGTATCAAAGTAGCCACTGTACAGTCTAAAATGTCAGATGTAAAGTGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAACTCAGAGTAGAATCATCATCTAAATTGTGGGCTCAATGTGTCCAGTTACACAATGACATTCTCTTAGCTAAAGATACTACTGAAGCCTTTGAAAAAATGGTTTCACTACTTTCTGTTTTGCTTTCCATGCAGGGTGCTGTAGACATAAACAAGCTTTGTGAAGAAATGCTGGACAACAGGGCAACCTTACAAGCTATAGCCTCAGAGTTTAGTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAGCAGGCTGTTGCTAATGGTGATTCTGAAGTTGTTCTTAAAAAGTTGAAGAAGTCTTTGAATGTGGCTAAATCTGAATTTGACCGTGATGCAGCCATGCAACGTAAGTTGGAAAAGATGGCTGATCAAGCTATGACCCAAATGTATAAACAGGCTAGATCTGAGGACAAGAGGGCAAAAGTTACTAGTGCTATGCAGACAATGCTTTTCACTATGCTTAGAAAGTTGGATAATGATGCACTCAACAACATTATCAACAATGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACAACAGCAGCCAAACTAATGGTTGTCATACCAGACTATAACACATATAAAAATACGTGTGATGGTACAACATTTACTTATGCATCAGCATTGTGGGAAATCCAACAGGTTGTAGATGCAGATAGTAAAATTGTTCAACTTAGTGAAATTAGTATGGACAATTCACCTAATTTAGCATGGCCTCTTATTGTAACAGCTTTAAGGGCCAATTCTGCTGTCAAATTACAGAATAATGAGCTTAGTCCTGTTGCACTACGACAGATGTCTTGTGCTGCCGGTACTACACAAACTGCTTGCACTGATGACAATGCGTTAGCTTACTACAACACAACAAAGGGAGGTAGGTTTGTACTTGCACTGTTATCCGATTTACAGGATTTGAAATGGGCTAGATTCCCTAAGAGTGATGGAACTGGTACTATCTATACAGAACTGGAACCACCTTGTAGGTTTGTTACAGACACACCTAAAGGTCCTAAAGTGAAGTATTTATACTTTATTAAAGGATTAAACAACCTAAATAGAGGTATGGTACTTGGTAGTTTAGCTGCCACAGTACGTCTACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATTCAACTGTATTATCTTTCTGTGCTTTTGCTGTAGATGCTGCTAAAGCTTACAAAGATTATCTAGCTAGTGGGGGACAACCAATCACTAATTGTGTTAAGATGTTGTGTACACACACTGGTACTGGTCAGGCAATAACAGTTACACCGGAAGCCAATATGGATCAAGAATCCTTTGGTGGTGCATCGTGTTGTCTGTACTGCCGTTGCCACATAGATCATCCAAATCCTAAAGGATTTTGTGACTTAAAAGGTAAGTATGTACAAATACCTACAACTTGTGCTAATGACCCTGTGGGTTTTACACTTAAAAACACAGTCTGTACCGTCTGCGGTATGTGGAAAGGTTATGGCTGTAGTTGTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTGACATCTACAATGATAAAGTAGCTGGTTTTGCTAAATTCCTAAAAACTAATTGTTGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTTTGTAGTTAAGAGACACACTTTCTCTAACTACCAACATGAAGAAACAATTTATAATTTACTTAAGGATTGTCCAGCTGTTGCTAAACATGACTTCTTTAAGTTTAGAATAGACGGTGACATGGTACCACATATATCACGTCAACGTCTTACTAAATACACAATGGCAGACCTCGTCTATGCTTTAAGGCATTTTGATGAAGGTAATTGTGACACATTAAAAGAAATACTTGTCACATACAATTGTTGTGATGATGATTATTTCAATAAAAAGGACTGGTATGATTTTGTAGAAAACCCAGATATATTACGCGTATACGCCAACTTAGGTGAACGTGTACGCCAAGCTTTGTTAAAAACAGTACAATTCTGTGATGCCATGCGAAATGCTGGTATTGTTGGTGTACTGACATTAGATAATCAAGATCTCAATGGTAACTGGTATGATTTCGGTGATTTCATACAAACCACGCCAGGTAGTGGAGTTCCTGTTGTAGATTCTTATTATTCATTGTTAATGCCTATATTAACCTTGACCAGGGCTTTAACTGCAGAGTCACATGTTGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAATATGACTTCACGGAAGAGAGGTTAAAACTCTTTGACCGTTATTTTAAATATTGGGATCAGACATACCACCCAAATTGTGTTAACTGTTTGGATGACAGATGCATTCTGCATTGTGCAAACTTTAATGTTTTATTCTCTACAGTGTTCCCACCTACAAGTTTTGGACCACTAGTGAGAAAAATATTTGTTGATGGTGTTCCATTTGTAGTTTCAACTGGATACCACTTCAGAGAGCTAGGTGTTGTACATAATCAGGATGTAAACTTACATAGCTCTAGACTTAGTTTTAAGGAATTACTTGTGTATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGTAATCTATTACTAGATAAACGCACTACGTGCTTTTCAGTAGCTGCACTTACTAACAATGTTGCTTTTCAAACTGTCAAACCCGGTAATTTTAACAAAGACTTCTATGACTTTGCTGTGTCTAAGGGTTTCTTTAAGGAAGGAAGTTCTGTTGAATTAAAACACTTCTTCTTTGCTCAGGATGGTAATGCTGCTATCAGCGATTATGACTACTATCGTTATAATCTACCAACAATGTGTGATATCAGACAACTACTATTTGTAGTTGAAGTTGTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCTAACCAAGTCATCGTCAACAACCTAGACAAATCAGCTGGTTTTCCATTTAATAAATGGGGTAAGGCTAGACTTTATTATGATTCAATGAGTTATGAGGATCAAGATGCACTTTTCGCATATACAAAACGTAATGTCATCCCTACTATAACTCAAATGAATCTTAAGTATGCCATTAGTGCAAAGAATAGAGCTCGCACCGTAGCTGGTGTCTCTATCTGTAGTACTATGACCAATAGACAGTTTCATCAAAAATTATTGAAATCAATAGCCGCCACTAGAGGAGCTACTGTAGTAATTGGAACAAGCAAATTCTATGGTGGTTGGCACAACATGTTAAAAACTGTTTATAGTGATGTAGAAAACCCTCACCTTATGGGTTGGGATTATCCTAAATGTGATAGAGCCATGCCTAACATGCTTAGAATTATGGCCTCACTTGTTCTTGCTCGCAAACATACAACGTGTTGTAGCTTGTCACACCGTTTCTATAGATTAGCTAATGAGTGTGCTCAAGTATTGAGTGAAATGGTCATGTGTGGCGGTTCACTATATGTTAAACCAGGTGGAACCTCATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGTCAAGCTGTCACGGCCAATGTTAATGCACTTTTATCTACTGATGGTAACAAAATTGCCGATAAGTATGTCCGCAATTTACAACACAGACTTTATGAGTGTCTCTATAGAAATAGAGATGTTGACACAGACTTTGTGAATGAGTTTTACGCATATTTGCGTAAACATTTCTCAATGATGATACTCTCTGACGATGCTGTTGTGTGTTTCAATAGCACTTATGCATCTCAAGGTCTAGTGGCTAGCATAAAGAACTTTAAGTCAGTTCTTTATTATCAAAACAATGTTTTTATGTCTGAAGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTTGCTCTCAACATACAATGCTAGTTAAACAGGGTGATGATTATGTGTACCTTCCTTACCCAGATCCATCAAGAATCCTAGGGGCCGGCTGTTTTGTAGATGATATCGTAAAAACAGATGGTACACTTATGATTGAACGGTTCGTGTCTTTAGCTATAGATGCTTACCCACTTACTAAACATCCTAATCAGGAGTATGCTGATGTCTTTCATTTGTACTTACAATACATAAGAAAGCTACATGATGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATGATAACACTTCAAGGTATTGGGAACCTGAGTTTTATGAGGCTATGTACACACCGCATACAGTCTTACAGGCTGTTGGGGCTTGTGTTCTTTGCAATTCACAGACTTCATTAAGATGTGGTGCTTGCATACGTAGACCATTCTTATGTTGTAAATGCTGTTACGACCATGTCATATCAACATCACATAAATTAGTCTTGTCTGTTAATCCGTATGTTTGCAATGCTCCAGGTTGTGATGTCACAGATGTGACTCAACTTTACTTAGGAGGTATGAGCTATTATTGTAAATCACATAAACCACCCATTAGTTTTCCATTGTGTGCTAATGGACAAGTTTTTGGTTTATATAAAAATACATGTGTTGGTAGCGATAATGTTACTGACTTTAATGCAATTGCAACATGTGACTGGACAAATGCTGGTGATTACATTTTAGCTAACACCTGTACTGAAAGACTCAAGCTTTTTGCAGCAGAAACGCTCAAAGCTACTGAGGAGACATTTAAACTGTCTTATGGTATTGCTACTGTACGTGAAGTGCTGTCTGACAGAGAATTACATCTTTCATGGGAAGTTGGTAAACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAACTAAAAACAGTAAAGTACAAATAGGAGAGTACACCTTTGAAAAAGGTGACTATGGTGATGCTGTTGTTTACCGAGGTACAACAACTTACAAATTAAATGTTGGTGATTATTTTGTGCTGACATCACATACAGTAATGCCATTAAGTGCACCTACACTAGTGCCACAAGAGCACTATGTTAGAATTACTGGCTTATACCCAACACTCAATATCTCAGATGAGTTTTCTAGCAATGTTGCAAATTATCAAAAGGTTGGTATGCAAAAGTATTCTACACTCCAGGGACCACCTGGTACTGGTAAGAGTCATTTTGCTATTGGCCTAGCTCTCTACTACCCTTCTGCTCGCATAGTGTATACAGCTTGCTCTCATGCCGCTGTTGATGCACTATGTGAGAAGGCATTAAAATATTTGCCTATAGATAAATGTAGTAGAATTATACCTGCACGTGCTCGTGTAGAGTGTTTTGATAAATTCAAAGTGAATTCAACATTAGAACAGTATGTCTTTTGTACTGTAAATGCATTGCCTGAGACGACAGCAGATATAGTTGTCTTTGATGAAATTTCAATGGCCACAAATTATGATTTGAGTGTTGTCAATGCCAGATTACGTGCTAAGCACTATGTGTACATTGGCGACCCTGCTCAATTACCTGCACCACGCACATTGCTAACTAAGGGCACACTAGAACCAGAATATTTCAATTCAGTGTGTAGACTTATGAAAACTATAGGTCCAGACATGTTCCTCGGAACTTGTCGGCGTTGTCCTGCTGAAATTGTTGACACTGTGAGTGCTTTGGTTTATGATAATAAGCTTAAAGCACATAAAGACAAATCAGCTCAATGCTTTAAAATGTTTTATAAGGGTGTTATCACGCATGATGTTTCATCTGCAATTAACAGGCCACAAATAGGCGTGGTAAGAGAATTCCTTACACGTAACCCTGCTTGGAGAAAAGCTGTCTTTATTTCACCTTATAATTCACAGAATGCTGTAGCCTCAAAGATTTTGGGACTACCAACTCAAACTGTTGATTCATCACAGGGCTCAGAATATGACTATGTCATATTCACTCAAACCACTGAAACAGCTCACTCTTGTAATGTAAACAGATTTAATGTTGCTATTACCAGAGCAAAAGTAGGCATACTTTGCATAATGTCTGATAGAGACCTTTATGACAAGTTGCAATTTACAAGTCTTGAAATTCCACGTAGGAATGTGGCAACTTTACAAGCTGAAAATGTAACAGGACTCTTTAAAGATTGTAGTAAGGTAATCACTGGGTTACATCCTACACAGGCACCTACACACCTCAGTGTTGACACTAAATTCAAAACTGAAGGTTTATGTGTTGACATACCTGGCATACCTAAGGACATGACCTATAGAAGACTCATCTCTATGATGGGTTTTAAAATGAATTATCAAGTTAATGGTTACCCTAACATGTTTATCACCCGCGAAGAAGCTATAAGACATGTACGTGCATGGATTGGCTTCGATGTCGAGGGGTGTCATGCTACTAGAGAAGCTGTTGGTACCAATTTACCTTTACAGCTAGGTTTTTCTACAGGTGTTAACCTAGTTGCTGTACCTACAGGTTATGTTGATACACCTAATAATACAGATTTTTCCAGAGTTAGTGCTAAACCACCGCCTGGAGATCAATTTAAACACCTCATACCACTTATGTACAAAGGACTTCCTTGGAATGTAGTGCGTATAAAGATTGTACAAATGTTAAGTGACACACTTAAAAATCTCTCTGACAGAGTCGTATTTGTCTTATGGGCACATGGCTTTGAGTTGACATCTATGAAGTATTTTGTGAAAATAGGACCTGAGCGCACCTGTTGTCTATGTGATAGACGTGCCACATGCTTTTCCACTGCTTCAGACACTTATGCCTGTTGGCATCATTCTATTGGATTTGATTACGTCTATAATCCGTTTATGATTGATGTTCAACAATGGGGTTTTACAGGTAACCTACAAAGCAACCATGATCTGTATTGTCAAGTCCATGGTAATGCACATGTAGCTAGTTGTGATGCAATCATGACTAGGTGTCTAGCTGTCCACGAGTGCTTTGTTAAGCGTGTTGACTGGACTATTGAATATCCTATAATTGGTGATGAACTGAAGATTAATGCGGCTTGTAGAAAGGTTCAACACATGGTTGTTAAAGCTGCATTATTAGCAGACAAATTCCCAGTTCTTCACGACATTGGTAACCCTAAAGCTATTAAGTGTGTACCTCAAGCTGATGTAGAATGGAAGTTCTATGATGCACAGCCTTGTAGTGACAAAGCTTATAAAATAGAAGAATTATTCTATTCTTATGCCACACATTCTGACAAATTCACAGATGGTGTATGCCTATTTTGGAATTGCAATGTCGATAGATATCCTGCTAATTCCATTGTTTGTAGATTTGACACTAGAGTGCTATCTAACCTTAACTTGCCTGGTTGTGATGGTGGCAGTTTGTATGTAAATAAACATGCATTCCACACACCAGCTTTTGATAAAAGTGCTTTTGTTAATTTAAAACAATTACCATTTTTCTATTACTCTGACAGTCCATGTGAGTCTCATGGAAAACAAGTAGTGTCAGATATAGATTATGTACCACTAAAGTCTGCTACGTGTATAACACGTTGCAATTTAGGTGGTGCTGTCTGTAGACATCATGCTAATGAGTACAGATTGTATCTCGATGCTTATAACATGATGATCTCAGCTGGCTTTAGCTTGTGGGTTTACAAACAATTTGATACTTATAACCTCTGGAACACTTTTACAAGACTTCAGAGTTTAGAAAATGTGGCTTTTAATGTTGTAAATAAGGGACACTTTGATGGACAACAGGGTGAAGTACCAGTTTCTATCATTAATAACACTGTTTACACAAAAGTTGATGGTGTTGATGTAGAATTGTTTGAAAATAAAACAACATTACCTGTTAATGTAGCATTTGAGCTTTGGGCTAAGCGCAACATTAAACCAGTACCAGAGGTGAAAATACTCAATAATTTGGGTGTGGACATTGCTGCTAATACTGTGATCTGGGACTACAAAAGAGATGCTCCAGCACATATATCTACTATTGGTGTTTGTTCTATGACTGACATAGCCAAGAAACCAACTGAAACGATTTGTGCACCACTCACTGTCTTTTTTGATGGTAGAGTTGATGGTCAAGTAGACTTATTTAGAAATGCCCGTAATGGTGTTCTTATTACAGAAGGTAGTGTTAAAGGTTTACAACCATCTGTAGGTCCCAAACAAGCTAGTCTTAATGGAGTCACATTAATTGGAGAAGCCGTAAAAACACAGTTCAATTATTATAAGAAAGTTGATGGTGTTGTCCAACAATTACCTGAAACTTACTTTACTCAGAGTAGAAATTTACAAGAATTTAAACCCAGGAGTCAAATGGAAATTGATTTCTTAGAATTAGCTATGGATGAATTCATTGAACGGTATAAATTAGAAGGCTATGCCTTCGAACATATCGTTTATGGAGATTTTAGTCATAGTCAGTTAGGTGGTTTACATCTACTGATTGGACTAGCTAAACGTTTTAAGGAATCACCTTTTGAATTAGAAGATTTTATTCCTATGGACAGTACAGTTAAAAACTATTTCATAACAGATGCGCAAACAGGTTCATCTAAGTGTGTGTGTTCTGTTATTGATTTATTACTTGATGATTTTGTTGAAATAATAAAATCCCAAGATTTATCTGTAGTTTCTAAGGTTGTCAAAGTGACTATTGACTATACAGAAATTTCATTTATGCTTTGGTGTAAAGATGGCCATGTAGAAACATTTTACCCAAAATTACAATCTAGTCAAGCGTGGCAACCGGGTGTTGCTATGCCTAATCTTTACAAAATGCAAAGAATGCTATTAGAAAAGTGTGACCTTCAAAATTATGGTGATAGTGCAACATTACCTAAAGGCATAATGATGAATGTCGCAAAATATACTCAACTGTGTCAATATTTAAACACATTAACATTAGCTGTACCCTATAATATGAGAGTTATACATTTTGGTGCTGGTTCTGATAAAGGAGTTGCACCAGGTACAGCTGTTTTAAGACAGTGGTTGCCTACGGGTACGCTGCTTGTCGATTCAGATCTTAATGACTTTGTCTCTGATGCAGATTCAACTTTGATTGGTGATTGTGCAACTGTACATACAGCTAATAAATGGGATCTCATTATTAGTGATATGTACGACCCTAAGACTAAAAATGTTACAAAAGAAAATGACTCTAAAGAGGGTTTTTTCACTTACATTTGTGGGTTTATACAACAAAAGCTAGCTCTTGGAGGTTCCGTGGCTATAAAGATAACAGAACATTCTTGGAATGCTGATCTTTATAAGCTCATGGGACACTTCGCATGGTGGACAGCCTTTGTTACTAATGTGAATGCGTCATCATCTGAAGCATTTTTAATTGGATGTAATTATCTTGGCAAACCACGCGAACAAATAGATGGTTATGTCATGCATGCAAATTACATATTTTGGAGGAATACAAATCCAATTCAGTTGTCTTCCTATTCTTTATTTGACATGAGTAAATTTCCCCTTAAATTAAGGGGTACTGCTGTTATGTCTTTAAAAGAAGGTCAAATCAATGATATGATTTTATCTCTTCTTAGTAAAGGTAGACTTATAATTAGAGAAAACAACAGAGTTGTTATTTCTAGTGATGTTCTTGTTAACAACTAAACGAACAATGTTTGTTTTTCTTGTTTTATTGCCACTAGTCTCTAGTCAGTGTGTTAATCTTACAACCAGAACTCAATTACCCCCTGCATACACTAATTCTTTCACACGTGGTGTTTATTACCCTGACAAAGTTTTCAGATCCTCAGTTTTACATTCAACTCAGGACTTGTTCTTACCTTTCTTTTCCAATGTTACTTGGTTCCATGCTATACATGTCTCTGGGACCAATGGTACTAAGAGGTTTGATAACCCTGTCCTACCATTTAATGATGGTGTTTATTTTGCTTCCACTGAGAAGTCTAACATAATAAGAGGCTGGATTTTTGGTACTACTTTAGATTCGAAGACCCAGTCCCTACTTATTGTTAATAACGCTACTAATGTTGTTATTAAAGTCTGTGAATTTCAATTTTGTAATGATCCATTTTTGGGTGTTTATTACCACAAAAACAACAAAAGTTGGATGGAAAGTGAGTTCAGAGTTTATTCTAGTGCGAATAATTGCACTTTTGAATATGTCTCTCAGCCTTTTCTTATGGACCTTGAAGGAAAACAGGGTAATTTCAAAAATCTTAGGGAATTTGTGTTTAAGAATATTGATGGTTATTTTAAAATATATTCTAAGCACACGCCTATTAATTTAGTGCGTGATCTCCCTCAGGGTTTTTCGGCTTTAGAACCATTGGTAGATTTGCCAATAGGTATTAACATCACTAGGTTTCAAACTTTACTTGCTTTACATAGAAGTTATTTGACTCCTGGTGATTCTTCTTCAGGTTGGACAGCTGGTGCTGCAGCTTATTATGTGGGTTATCTTCAACCTAGGACTTTTCTATTAAAATATAATGAAAATGGAACCATTACAGATGCTGTAGACTGTGCACTTGACCCTCTCTCAGAAACAAAGTGTACGTTGAAATCCTTCACTGTAGAAAAAGGAATCTATCAAACTTCTAACTTTAGAGTCCAACCAACAGAATCTATTGTTAGATTTCCTAATATTACAAACTTGTGCCCTTTTGGTGAAGTTTTTAACGCCACCAGATTTGCATCTGTTTATGCTTGGAACAGGAAGAGAATCAGCAACTGTGTTGCTGATTATTCTGTCCTATATAATTCCGCATCATTTTCCACTTTTAAGTGTTATGGAGTGTCTCCTACTAAATTAAATGATCTCTGCTTTACTAATGTCTATGCAGATTCATTTGTAATTAGAGGTGATGAAGTCAGACAAATCGCTCCAGGGCAAACTGGAAAGATTGCTGATTATAATTATAAATTACCAGATGATTTTACAGGCTGCGTTATAGCTTGGAATTCTAACAATCTTGATTCTAAGGTTGGTGGTAATTATAATTACCTGTATAGATTGTTTAGGAAGTCTAATCTCAAACCTTTTGAGAGAGATATTTCAACTGAAATCTATCAGGCCGGTAGCACACCTTGTAATGGTGTTGAAGGTTTTAATTGTTACTTTCCTTTACAATCATATGGTTTCCAACCCACTAATGGTGTTGGTTACCAACCATACAGAGTAGTAGTACTTTCTTTTGAACTTCTACATGCACCAGCAACTGTTTGTGGACCTAAAAAGTCTACTAATTTGGTTAAAAACAAATGTGTCAATTTCAACTTCAATGGTTTAACAGGCACAGGTGTTCTTACTGAGTCTAACAAAAAGTTTCTGCCTTTCCAACAATTTGGCAGAGACATTGCTGACACTACTGATGCTGTCCGTGATCCACAGACACTTGAGATTCTTGACATTACACCATGTTCTTTTGGTGGTGTCAGTGTTATAACACCAGGAACAAATACTTCTAACCAGGTTGCTGTTCTTTATCAGGATGTTAACTGCACAGAAGTCCCTGTTGCTATTCATGCAGATCAACTTACTCCTACTTGGCGTGTTTATTCTACAGGTTCTAATGTTTTTCAAACACGTGCAGGCTGTTTAATAGGGGCTGAACATGTCAACAACTCATATGAGTGTGACATACCCATTGGTGCAGGTATATGCGCTAGTTATCAGACTCAGACTAATTCTCCTCGGCGGGCACGTAGTGTAGCTAGTCAATCCATCATTGCCTACACTATGTCACTTGGTGCAGAAAATTCAGTTGCTTACTCTAATAACTCTATTGCCATACCCACAAATTTTACTATTAGTGTTACCACAGAAATTCTACCAGTGTCTATGACCAAGACATCAGTAGATTGTACAATGTACATTTGTGGTGATTCAACTGAATGCAGCAATCTTTTGTTGCAATATGGCAGTTTTTGTACACAATTAAACCGTGCTTTAACTGGAATAGCTGTTGAACAAGACAAAAACACCCAAGAAGTTTTTGCACAAGTCAAACAAATTTACAAAACACCACCAATTAAAGATTTTGGTGGTTTTAATTTTTCACAAATATTACCAGATCCATCAAAACCAAGCAAGAGGTCATTTATTGAAGATCTACTTTTCAACAAAGTGACACTTGCAGATGCTGGCTTCATCAAACAATATGGTGATTGCCTTGGTGATATTGCTGCTAGAGACCTCATTTGTGCACAAAAGTTTAACGGCCTTACTGTTTTGCCACCTTTGCTCACAGATGAAATGATTGCTCAATACACTTCTGCACTGTTAGCGGGTACAATCACTTCTGGTTGGACCTTTGGTGCAGGTGCTGCATTACAAATACCATTTGCTATGCAAATGGCTTATAGGTTTAATGGTATTGGAGTTACACAGAATGTTCTCTATGAGAACCAAAAATTGATTGCCAACCAATTTAATAGTGCTATTGGCAAAATTCAAGACTCACTTTCTTCCACAGCAAGTGCACTTGGAAAACTTCAAGATGTGGTCAACCAAAATGCACAAGCTTTAAACACGCTTGTTAAACAACTTAGCTCCAATTTTGGTGCAATTTCAAGTGTTTTAAATGATATCCTTTCACGTCTTGACAAAGTTGAGGCTGAAGTGCAAATTGATAGGTTGATCACAGGCAGACTTCAAAGTTTGCAGACATATGTGACTCAACAATTAATTAGAGCTGCAGAAATCAGAGCTTCTGCTAATCTTGCTGCTACTAAAATGTCAGAGTGTGTACTTGGACAATCAAAAAGAGTTGATTTTTGTGGAAAGGGCTATCATCTTATGTCCTTCCCTCAGTCAGCACCTCATGGTGTAGTCTTCTTGCATGTGACTTATGTCCCTGCACAAGAAAAGAACTTCACAACTGCTCCTGCCATTTGTCATGATGGAAAAGCACACTTTCCTCGTGAAGGTGTCTTTGTTTCAAATGGCACACACTGGTTTGTAACACAAAGGAATTTTTATGAACCACAAATCATTACTACAGACAACACATTTGTGTCTGGTAACTGTGATGTTGTAATAGGAATTGTCAACAACACAGTTTATGATCCTTTGCAACCTGAATTAGACTCATTCAAGGAGGAGTTAGATAAATATTTTAAGAATCATACATCACCAGATGTTGATTTAGGTGACATCTCTGGCATTAATGCTTCAGTTGTAAACATTCAAAAAGAAATTGACCGCCTCAATGAGGTTGCCAAGAATTTAAATGAATCTCTCATCGATCTCCAAGAACTTGGAAAGTATGAGCAGTATATAAAATGGCCATGGTACATTTGGCTAGGTTTTATAGCTGGCTTGATTGCCATAGTAATGGTGACAATTATGCTTTGCTGTATGACCAGTTGCTGTAGTTGTCTCAAGGGCTGTTGTTCTTGTGGATCCTGCTGCAAATTTGATGAAGACGACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACATAAACGAACTTATGGATTTGTTTATGAGAATCTTCACAATTGGAACTGTAACTTTGAAGCAAGGTGAAATCAAGGATGCTACTCCTTCAGATTTTGTTCGCGCTACTGCAACGATACCGATACAAGCCTCACTCCCTTTCGGATGGCTTATTGTTGGCGTTGCACTTCTTGCTGTTTTTCAGAGCGCTTCCAAAATCATAACCCTCAAAAAGAGATGGCAACTAGCACTCTCCAAGGGTGTTCACTTTGTTTGCAACTTGCTGTTGTTGTTTGTAACAGTTTACTCACACCTTTTGCTCGTTGCTGCTGGCCTTGAAGCCCCTTTTCTCTATCTTTATGCTTTAGTCTACTTCTTGCAGAGTATAAACTTTGTAAGAATAATAATGAGGCTTTGGCTTTGCTGGAAATGCCGTTCCAAAAACCCATTACTTTATGATGCCAACTATTTTCTTTGCTGGCATACTAATTGTTACGACTATTGTATACCTTACAATAGTGTAACTTCTTCAATTGTCATTACTTCAGGTGATGGCACAACAAGTCCTATTTCTGAACATGACTACCAGATTGGTGGTTATACTGAAAAATGGGAATCTGGAGTAAAAGACTGTGTTGTATTACACAGTTACTTCACTTCAGACTATTACCAGCTGTACTCAACTCAATTGAGTACAGACACTGGTGTTGAACATGTTACCTTCTTCATCTACAATAAAATTGTTGATGAGCCTGAAGAACATGTCCAAATTCACACAATCGACGGTTCATCCGGAGTTGTTAATCCAGTAATGGAACCAATTTATGATGAACCGACGACGACTACTAGCGTGCCTTTGTAAGCACAAGCTGATGAGTACGAACTTATGTACTCATTCGTTTCGGAAGAGACAGGTACGTTAATAGTTAATAGCGTACTTCTTTTTCTTGCTTTCGTGGTATTCTTGCTAGTTACACTAGCCATCCTTACTGCGCTTCGATTGTGTGCGTACTGCTGCAATATTGTTAACGTGAGTCTTGTAAAACCTTCTTTTTACGTTTACTCTCGTGTTAAAAATCTGAATTCTTCTAGAGTTCCTGATCTTCTGGTCTAAACGAACTAAATATTATATTAGTTTTTCTGTTTGGAACTTTAATTTTAGCCATGGCAGATTCCAACGGTACTATTACCGTTGAAGAGCTTAAAAAGCTCCTTGAACAATGGAACCTAGTAATAGGTTTCCTATTCCTTACATGGATTTGTCTTCTACAATTTGCCTATGCCAACAGGAATAGGTTTTTGTATATAATTAAGTTAATTTTCCTCTGGCTGTTATGGCCAGTAACTTTAGCTTGTTTTGTGCTTGCTGCTGTTTACAGAATAAATTGGATCACCGGTGGAATTGCTATCGCAATGGCTTGTCTTGTAGGCTTGATGTGGCTCAGCTACTTCATTGCTTCTTTCAGACTGTTTGCGCGTACGCGTTCCATGTGGTCATTCAATCCAGAAACTAACATTCTTCTCAACGTGCCACTCCATGGCACTATTCTGACCAGACCGCTTCTAGAAAGTGAACTCGTAATCGGAGCTGTGATCCTTCGTGGACATCTTCGTATTGCTGGACACCATCTAGGACGCTGTGACATCAAGGACCTGCCTAAAGAAATCACTGTTGCTACATCACGAACGCTTTCTTATTACAAATTGGGAGCTTCGCAGCGTGTAGCAGGTGACTCAGGTTTTGCTGCATACAGTCGCTACAGGATTGGCAACTATAAATTAAACACAGACCATTCCAGTAGCAGTGACAATATTGCTTTGCTTGTACAGTAAGTGACAACAGATGTTTCATCTCGTTGACTTTCAGGTTACTATAGCAGAGATATTACTAATTATTATGAGGACTTTTAAAGTTTCCATTTGGAATCTTGATTACATCATAAACCTCATAATTAAAAATTTATCTAAGTCACTAACTGAGAATAAATATTCTCAATTAGATGAAGAGCAACCAATGGAGATTGATTAAACGAACATGAAAATTATTCTTTTCTTGGCACTGATAACACTCGCTACTTGTGAGCTTTATCACTACCAAGAGTGTGTTAGAGGTACAACAGTACTTTTAAAAGAACCTTGCTCTTCTGGAACATACGAGGGCAATTCACCATTTCATCCTCTAGCTGATAACAAATTTGCACTGACTTGCTTTAGCACTCAATTTGCTTTTGCTTGTCCTGACGGCGTAAAACACGTCTATCAGTTACGTGCCAGATCAGTTTCACCTAAACTGTTCATCAGACAAGAGGAAGTTCAAGAACTTTACTCTCCAATTTTTCTTATTGTTGCGGCAATAGTGTTTATAACACTTTGCTTCACACTCAAAAGAAAGACAGAATGATTGAACTTTCATTAATTGACTTCTATTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTATCTTTTGGTTCTCACTTGAACTGCAAGATCATAATGAAACTTGTCACGCCTAAACGAACATGAAATTTCTTGTTTTCTTAGGAATCATCACAACTGTAGCTGCATTTCACCAAGAATGTAGTTTACAGTCATGTACTCAACATCAACCATATGTAGTTGATGACCCGTGTCCTATTCACTTCTATTCTAAATGGTATATTAGAGTAGGAGCTAGAAAATCAGCACCTTTAATTGAATTGTGCGTGGATGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATACAGTTTCCTGTTTACCTTTTACAATTAATTGCCAGGAACCTAAATTGGGTAGTCTTGTAGTGCGTTGTTCGTTCTATGAAGACTTTTTAGAGTATCATGACGTTCGTGTTGTTTTAGATTTCATCTAAACGAACAAACTAAAATGTCTGATAATGGACCCCAAAATCAGCGAAATGCACCCCGCATTACGTTTGGTGGACCCTCAGATTCAACTGGCAGTAACCAGAATGGAGAACGCAGTGGGGCGCGATCAAAACAACGTCGGCCCCAAGGTTTACCCAATAATACTGCGTCTTGGTTCACCGCTCTCACTCAACATGGCAAGGAAGACCTTAAATTCCCTCGAGGACAAGGCGTTCCAATTAACACCAATAGCAGTCCAGATGACCAAATTGGCTACTACCGAAGAGCTACCAGACGAATTCGTGGTGGTGACGGTAAAATGAAAGATCTCAGTCCAAGATGGTATTTCTACTACCTAGGAACTGGGCCAGAAGCTGGACTTCCCTATGGTGCTAACAAAGACGGCATCATATGGGTTGCAACTGAGGGAGCCTTGAATACACCAAAAGATCACATTGGCACCCGCAATCCTGCTAACAATGCTGCAATCGTGCTACAACTTCCTCAAGGAACAACATTGCCAAAAGGCTTCTACGCAGAAGGGAGCAGAGGCGGCAGTCAAGCCTCTTCTCGTTCCTCATCACGTAGTCGCAACAGTTCAAGAAATTCAACTCCAGGCAGCAGTAGGGGAACTTCTCCTGCTAGAATGGCTGGCAATGGCGGTGATGCTGCTCTTGCTTTGCTGCTGCTTGACAGATTGAACCAGCTTGAGAGCAAAATGTCTGGTAAAGGCCAACAACAACAAGGCCAAACTGTCACTAAGAAATCTGCTGCTGAGGCTTCTAAGAAGCCTCGGCAAAAACGTACTGCCACTAAAGCATACAATGTAACACAAGCTTTCGGCAGACGTGGTCCAGAACAAACCCAAGGAAATTTTGGGGACCAGGAACTAATCAGACAAGGAACTGATTACAAACATTGGCCGCAAATTGCACAATTTGCCCCCAGCGCTTCAGCGTTCTTCGGAATGTCGCGCATTGGCATGGAAGTCACACCTTCGGGAACGTGGTTGACCTACACAGGTGCCATCAAATTGGATGACAAAGATCCAAATTTCAAAGATCAAGTCATTTTGCTGAATAAGCATATTGACGCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAGAAGGCTGATGAAACTCAAGCCTTACCGCAGAGACAGAAGAAACAGCAAACTGTGACTCTTCTTCCTGCTGCAGATTTGGATGATTTCTCCAAACAATTGCAACAATCCATGAGCAGTGCTGACTCAACTCAGGCCTAAACTCATGCAGACCACACAAGGCAGATGGGCTATATAAACGTTTTCGCTTTTCCGTTTACGATATATAGTCTACTCTTGTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA']
+        ]
+        # 0-based gene coordinates
+        # from, to, name, within gene codon offset (to deal with ORF1a/b overlap)
+        self.gene_coordinates = [[265, 13482, 'ORF1a', 0],
+                                 [13467, 21554, 'ORF1b', -1],
+                                 [21562, 25383, 'S', 0],
+                                 [25392, 26219, 'ORF3a', 0],
+                                 [26244, 26471, 'E', 0],
+                                 [26522, 27190, 'M', 0],
+                                 [27201, 27386, 'ORF6', 0],
+                                 [27393, 27758, 'ORF7a', 0],
+                                 [27893, 28258, 'ORF8', 0],
+                                 [28273, 29532, 'N', 0],
+                                 [29557, 29673, 'ORF10', 0]]
+        self.score_matrix_ = BioExt.scorematrices.DNA95.load()
+        if summary_json is not None:
+            self.summary_json = summary_json
+        if annotation_json is not None:
+            self.annotation_json = annotation_json
+        try:
+            if arguments.summary_input:
+                with open(arguments.summary_input) as fh:
+                    self.summary_json = json.load(fh)
+        except Exception:
+            pass
+        try:
+            if arguments.annotation_input:
+                with open(arguments.annotation_input) as fh:
+                    self.annotation_json = json.load(fh)
+        except Exception:
+            pass
+        self.gene = self.arguments.gene
+        self._get_incoming_labels()
+        self._get_map()
+
+    def summary(self):
+        try:
+            if self.summary_json is not None:
+                if self.gene not in self.summary_json:
+                    self.summary_json[self.gene] = {}
+            if self.cfel is not None:
+                self.cfel_summary()
+            if self.relax is not None:
+                self.relax_summary()
+            if self.busted is not None:
+                self.busted_summary()
+            if self.slac is not None:
+                self.slac_summary()
+            if self.fel is not None:
+                self.fel_summary()
+            if self.meme is not None:
+                self.meme_summary()
+            if self.meme_full is not None:
+                self.meme_full_summary()
+            if self.prime is not None:
+                self.prime_summary()
+            if self.fade is not None:
+                self.fade_summary()
+            if self.bgm is not None:
+                self.bgm_summary()
+        except Exception:
+            if self.gene:
+                del self.summary_json[self.gene]
+                if self.gene in self.annotation_json:
+                    del self.annotation_json[self.gene]
+            raise
+        return self.annotation_json, self.summary_json
+
+    def cfel_summary(self):
+        self.cfel = self._load_json(self.arguments.cfel)
+        if self.cfel is None:
+            return
+        node_tags = {}
+        _ = self._newick_parser(self.cfel['input']['trees']['0'], False, node_tags, self.cfel)['json']
+        if self.summary_json is not None:
+            omegas = {}
+            T = {}
+            for k in [[k.split('*')[1], v[0][0]] for k, v in self.cfel['fits']['Global MG94xREV']['Rate Distributions'].items()]:
+                if k[0] != 'background':
+                    self.test_map[k[0]] = 'Test'
+                else:
+                    self.test_map[k[0]] = 'Reference'
+                omegas[k[0]] = k[1]
+                T[k[0]] = 0.
+            for branch, nt in (self.cfel['tested']['0']).items():
+                if branch not in node_tags:
+                    node_tags[branch] = []
+                info = self.cfel['branch attributes']['0'][branch]
+                if nt != '':
+                    T[nt] += info['Global MG94xREV']
+                node_tags[branch].append(info['Global MG94xREV'])
+            self.summary_json[self.gene]['rates'] = {'mean-omega': omegas, 'T': T}
+        beta_indices = []
+        p_indices = []
+        subs = []
+        for i, tag in enumerate(self.cfel['MLE']['headers']):
+            if tag[0].find('beta') == 0:
+                beta_indices.append([i, re.split(r'\(|\)', tag[0])[1]])
+            elif tag[0].find('P-value') == 0:
+                p_indices.append([i, re.split(r'\(|\)|for ', tag[0])[1]])
+            elif tag[0].find('subs') == 0:
+                subs.append([i, re.split(r'\(|\)', tag[0])[1]])
+        for i, row in enumerate(self.cfel['MLE']['content']['0']):
+            if self.annotation_json is not None and len(self.ref_map):  # if this is specified, write everything out
+                gs = self._get_genomic_annotation(i)
+                if gs[0] >= 0:
+                    self.include_in_annotation[i] = gs[0]
+                    self.annotation_json[gs[0]] = {
+                        'G': gs[1],
+                        'S': gs[2],
+                        'index': i,
+                        'bCFEL': {
+                            'p': row[4],
+                            'a': row[0],
+                            'b': self._make_report_dict(row, beta_indices),
+                            'pi': self._make_report_dict(row, p_indices),
+                            'pp': row[-2],
+                            's': self._make_report_dict(row, subs),
+                            'q': row[-3]
+                        }
+                    }
+            if row[-4] <= self.arguments.pvalue:
+                self.site_reports[i] = {'cfel': row}
+
+    def relax_summary(self):
+        self.relax = self._load_json(self.arguments.relax)
+        if self.relax is None:
+            return
+        if self.summary_json is not None:
+            relax_d = {}
+        for r, rr in self.summary_json[self.gene]['rates']['mean-omega'].items():
+            relax_d[r] = []
+            for ignored, rd in self.relax['fits']['RELAX alternative']['Rate Distributions'][self.test_map[r]].items():
+                relax_d[r].append(rd)
+        self.summary_json[self.gene]['rates']['relax'] = relax_d
+        self.summary_json[self.gene]['relax'] = {
+            'p': self.relax['test results']['p-value'],
+            'K': self.relax['test results']['relaxation or intensification parameter']
+        }
+
+    def busted_summary(self):
+        self.busted = self._load_json(self.arguments.busted)
+        if self.busted is None:
+            return
+        if self.summary_json is not None:
+            self.summary_json[self.gene]['rates']['busted'] = self.busted['fits']['Unconstrained model']['Rate Distributions']
+            self.summary_json[self.gene]['busted'] = {'p': self.busted['test results']['p-value'], }
+
+    def slac_summary(self):
+        self.slac = self._load_json(self.arguments.slac)
+        if self.slac is None:
+            return
+
+        def def_value():
+            return defaultdict(int)
+        compressed_subs = {}
+        node_tags = {}
+        the_tree = self._newick_parser(self.slac['input']['trees']['0'], False, node_tags, self.slac)['json']
+        root_node = None
+        if self.summary_json is not None:
+            for branch, info in self.slac['branch attributes']['0'].items():
+                if branch in node_tags:
+                    node_tags[branch].append(info['Global MG94xREV'])
+                else:
+                    root_node = branch
+            self.summary_json[self.gene]['tree'] = self.slac['input']['trees']['0']
+            self.summary_json[self.gene]['tree_tags'] = node_tags
+        if len(self.include_in_annotation):
+            for i in self.include_in_annotation:
+                report = self.annotation_json[self.include_in_annotation[i]]
+                counts_codon_site = {}
+                counts_aa_site = {}
+                gs = self._get_genomic_annotation(i)
+                if gs[0] >= 0:
+                    self.labels[root_node] = self.slac['branch attributes']['0'][root_node]['codon'][0][i]
+                    try:
+                        self._traverse_tree_in_order(the_tree, self.slac['branch attributes']['0'], i, None, root_node)
+                    except Exception:
+                        raise
+                    compressed_subs[gs[0]] = self.labels
+                for k in set([k[0] for k in node_tags.values()]):
+                    if len(k):
+                        counts_codon_site[k] = defaultdict(int)
+                        counts_aa_site[k] = defaultdict(int)
+                for branch, tag in node_tags.items():
+                    if len(tag[0]) > 0 and tag[1] is False:
+                        codon = self.slac['branch attributes']['0'][branch]['codon'][0][i]
+                        aa = self.slac['branch attributes']['0'][branch]['amino-acid'][0][i]
+                        counts_codon_site[tag[0]][codon] += 1
+                        counts_aa_site[tag[0]][aa] += 1
+                report['cdn'] = counts_codon_site
+                report['aa'] = counts_aa_site
+            self.summary_json[self.gene]['subs'] = compressed_subs
+
+    def fel_summary(self):
+        self.fel = self._load_json(self.arguments.fel)
+        if None in [self.fel, self.cfel]:
+            return
+        for i, row in enumerate(self.fel['MLE']['content']['0']):
+            if i in self.include_in_annotation:
+                self.annotation_json[self.include_in_annotation[i]]['bFEL'] = {'a': row[0], 'b': row[1], 'p': row[4]}
+            if i in self.site_reports or row[4] <= self.arguments.pvalue and row[1] > row[0]:
+                if i in self.site_reports:
+                    self.site_reports[i]['fel'] = row
+                else:
+                    self.site_reports[i] = {'fel': row,
+                                            'cfel': self.cfel['MLE']['content']['0'][i]}
+
+    def meme_summary(self):
+        self.meme = self._load_json(self.arguments.meme)
+        if None in [self.fel, self.cfel, self.meme]:
+            return
+        for i, row in enumerate(self.meme['MLE']['content']['0']):
+            if i in self.include_in_annotation:
+                self.annotation_json[self.include_in_annotation[i]]['bMEME'] = {
+                    'p': row[6],
+                    'a': row[0],
+                    'b+': row[3],
+                    'w+': row[4],
+                    'b-': row[1],
+                    'w-': row[2],
+                    'br': row[7]
+                }
+            if i in self.site_reports or row[6] <= self.arguments.pvalue:
+                if i in self.site_reports:
+                    self.site_reports[i]['meme'] = row
+                else:
+                    self.site_reports[i] = {'meme': row,
+                                            'fel': self.fel['MLE']['content']['0'][i],
+                                            'cfel': self.cfel['MLE']['content']['0'][i]}
+        # annotate branches with EBF support
+        for n, info in self.meme['branch attributes']['0'].items():
+
+            if n in self.summary_json[self.gene]['tree_tags']:
+                sig_sites = []
+                for tag, ebf in info.items():
+                    bits = tag.split(' ')
+                    if len(bits) >= 4 and ebf >= 100:
+                        sig_sites.append(self.include_in_annotation[int(bits[2]) - 1])
+                self.summary_json[self.gene]['tree_tags'][n].append(sig_sites)
+
+    def meme_full_summary(self):
+        self.meme_full = self._load_json(self.arguments.meme_full)
+        if None in [self.fel, self.cfel, self.meme, self.meme_full]:
+            return
+        for i, row in enumerate(self.meme_full['MLE']['content']['0']):
+            if i in self.include_in_annotation:
+                self.annotation_json[self.include_in_annotation[i]]['lMEME'] = {
+                    'p': row[6],
+                    'a': row[0],
+                    'b+': row[3],
+                    'w+': row[4],
+                    'b-': row[1],
+                    'w-': row[2],
+                    'br': row[7]
+                }
+            if i in self.site_reports or row[6] <= self.arguments.pvalue:
+                if i in self.site_reports:
+                    self.site_reports[i]['full-meme'] = row
+                else:
+                    self.site_reports[i] = {'full-meme': row,
+                                            'meme': self.meme['MLE']['content']['0'][i],
+                                            'fel': self.fel['MLE']['content']['0'][i],
+                                            'cfel': self.cfel['MLE']['content']['0'][i]}
+        # annotate branches with EBF support
+        for n, info in self.meme_full['branch attributes']['0'].items():
+            if n in self.summary_json[self.gene]['tree_tags']:
+                sig_sites = []
+                for tag, ebf in info.items():
+                    bits = tag.split(' ')
+                    if len(bits) >= 4 and ebf >= 100:
+                        sig_sites.append(self.include_in_annotation[int(bits[2]) - 1])
+                self.summary_json[self.gene]['tree_tags'][n].append(sig_sites)
+
+    def prime_summary(self):
+        self.prime = self._load_json(self.arguments.prime)
+        if self.prime is None:
+            return
+        if self.summary_json is not None:
+            h = self.prime['MLE']['headers']
+            self.summary_json[self.gene]['prime-properties'] = [h[k][1].replace('Importance for ', '') for k in range(6, len(h), 3)]
+        if len(self.include_in_annotation):
+            for i in self.include_in_annotation:
+                report = self.annotation_json[self.include_in_annotation[i]]
+                prime_info = self.prime['MLE']['content']['0'][i]
+                if prime_info:
+                    report['prime'] = {
+                        'p': [prime_info[k] for k in ([5, ] + list(range(7, len(prime_info), 3)))],
+                        'lambda': [prime_info[k] for k in range(6, len(prime_info), 3)]
+                    }
+                else:
+                    report['prime'] = None  # invariable
+
+    def fade_summary(self):
+        self.fade = self._load_json(self.arguments.fade)
+        if self.fade is None:
+            return
+        if len(self.include_in_annotation):
+            for i in self.include_in_annotation:
+                report = self.annotation_json[self.include_in_annotation[i]]
+                report['fade'] = {}
+                for residue, info in self.fade['MLE']['content'].items():
+                    if len(residue) == 1:
+                        report['fade'][residue] = {'rate': info['0'][i][1], 'BF': info['0'][i][-1]}
+
+    def bgm_summary(self):
+        self.bgm = self._load_json(self.arguments.bgm)
+        if self.bgm is None:
+            return
+        if self.summary_json is not None:
+            try:
+                self.summary_json[self.gene]['bgm'] = self.bgm['MLE']['content']
+            except KeyError:
+                self.summary_json[self.gene]['bgm'] = []
+
+    def _load_json(self, filename):
+        if filename is None:
+            return None
+        try:
+            with open(filename, 'r') as fh:
+                return json.load(fh)
+        except Exception:
+            raise
+
+    def _get_map(self):
+        for seq_record in SeqIO.parse(self.arguments.combined, 'fasta'):
+            seq_id = seq_record.description
+            ref_seq_re = re.compile(self.arguments.name)
+            if ref_seq_re.search(seq_id):
+                ref_seq = str(seq_record.seq).upper()
+                self.aligned_str = None
+
+                def output_record(x):
+                    listified_input = list(x)
+                    if len(listified_input) == 1:
+                        self.aligned_str = listified_input[0]
+
+                def ignore_record(x):
+                    pass
+                for s in self.ref_genes:
+                    _align_par(SeqRecord(Seq(s[1]), id=s[0]), [SeqRecord(Seq(ref_seq), id='ref')],
+                               self.score_matrix_, False, False, 0.8, ignore_record, output_record)
+                    if (self.aligned_str is not None):
+                        break
+                self.ref_map = self.aligned_str.seq.strip('-')
+                c = 0
+                i = 0
+                map_to_genome = []
+                while i < len(self.ref_map):
+                    if self.ref_map[i:i + 3] != '---':
+                        map_to_genome.append(i)
+                    i += 3
+                i = 0
+                c = 0
+                while i < len(ref_seq):
+                    if ref_seq[i:i + 3] != '---':
+                        self.ref_seq_map.append(map_to_genome[c // 3] + self.aligned_str.annotations['position'])
+                        c += 3
+                    else:
+                        self.ref_seq_map.append(-1)
+                    i += 3
+        if self.summary_json is not None:
+            if self.gene not in self.summary_json:
+                self.summary_json[self.gene] = dict()
+            self.summary_json[self.gene]['map'] = self.ref_seq_map
+
+    def _make_report_dict(self, row, indices):
+        result = {}
+        for i, t in indices:
+            result[t] = row[i]
+        return result
+
+    def _get_genomic_annotation(self, site):
+        genomic_site_coord = -1
+        gene_name = ''
+        gene_site = -1
+        if len(self.ref_seq_map):
+            genomic_site_coord = self.ref_seq_map[site]
+            if genomic_site_coord < 0:
+                gene_site = 'Not in SC2 (deletion)'
+            else:
+                gene_name = None
+                for k in self.gene_coordinates:
+                    if k[0] <= genomic_site_coord and k[1] > genomic_site_coord:
+                        genomic_site = ((genomic_site_coord + k[3]) - k[0]) // 3
+                        gene_name = k[2]
+                        gene_site = genomic_site + 1
+                        break
+                if gene_name is None:
+                    gene_name = 'Not mapped'
+        else:
+            gene_name = 'N/A'
+        return (genomic_site_coord, gene_name, gene_site)
+
+    def _traverse_tree_in_order(self, node, slac_data, i, parent_tag, root):
+        node_tag = None
+        if node is None:
+            return
+        try:
+            nn = root if node['name'] == 'root' else node['name']
+        except Exception:
+            raise
+        if nn in slac_data:
+            node_tag = slac_data[nn]['codon'][0][i]
+            if (parent_tag != node_tag):
+                self.labels[nn] = node_tag
+                self.labels[node['name']] = node_tag
+        if 'children' in node:
+            for c in node['children']:
+                if c is not None:
+                    if 'name' in c:
+                        self._traverse_tree_in_order(c, slac_data, i, node_tag, root)
+
+    def _match_node_names(self, qry_node, ref_node, mapping):
+        if 'children' in qry_node and 'children' in ref_node:
+            mapping[ref_node['name']] = qry_node['name']
+            if len(qry_node['children']) != len(ref_node['children']):
+                raise Exception('Internal topology mismatch')
+            for i, n in enumerate(ref_node['children']):
+                self._match_node_names(qry_node['children'][i], n, mapping)
+        elif 'children' in qry_node:
+            raise Exception('Topology mismatch')
+        elif 'children' in ref_node:
+            raise Exception('Topology mismatch')
+        else:
+            if qry_node['name'] != ref_node['name']:
+                raise Exception('Leaf name mismatch')
+
+    def _get_incoming_labels(self):
+        json_data = self._load_json(self.arguments.labels)
+        self.incoming_labels = json_data
+
+    def _newick_parser(self, nwk_str, bootstrap_values, track_tags, json_map):
+        clade_stack = []
+        automaton_state = 0
+        current_node_name = ''
+        current_node_attribute = ''
+        current_node_annotation = ''
+        quote_delimiter = None
+        name_quotes = {"'": 1, '"': 1}
+
+        def add_new_tree_level():
+            new_level = {'name': None}
+            the_parent = clade_stack[len(clade_stack) - 1]
+            if ('children' not in the_parent):
+                the_parent['children'] = []
+            clade_stack.append(new_level)
+            the_parent['children'].append(clade_stack[len(clade_stack) - 1])
+            clade_stack[len(clade_stack) - 1]['original_child_order'] = len(the_parent['children'])
+
+        def finish_node_definition():
+            nonlocal current_node_name
+            nonlocal current_node_annotation
+            nonlocal current_node_attribute
+            this_node = clade_stack.pop()
+            if (bootstrap_values and 'children' in this_node):
+                this_node['bootstrap_values'] = current_node_name
+            else:
+                this_node['name'] = current_node_name
+            this_node['attribute'] = current_node_attribute
+            this_node['annotation'] = current_node_annotation
+            try:
+                if 'children' not in this_node:
+                    node_tag = self.arguments.default_tag
+                    if json_map:
+                        tn = json_map['branch attributes']['0'][this_node['name']]
+                    else:
+                        tn = this_node
+                    nn = tn['original name'] if 'original name' in tn else tn['name']
+                    for k, v in self.incoming_labels.items():
+                        if nn.find(k) >= 0:
+                            node_tag = v
+                            break
+                else:
+                    counts = {}
+                    node_tag = ''
+                    for n in this_node['children']:
+                        counts[n['tag']] = 1 + (counts[n['tag']] if n['tag'] in counts else 0)
+                    if len(counts) == 1:
+                        node_tag = list(counts.keys())[0]
+                    this_node['tag'] = node_tag
+            except Exception:
+                raise
+            if track_tags is not None:
+                track_tags[this_node['name']] = [this_node['tag'], 'children' in this_node]
+            current_node_name = ''
+            current_node_attribute = ''
+            current_node_annotation = ''
+
+        def generate_error(location):
+            unexpected = nwk_str[location]
+            before = nwk_str[location - 20:location + 1]
+            after = nwk_str[location + 1:location + 20]
+            return {
+                'json': None,
+                'error': 'Unexpected %s in %s [ERROR HERE] %s' % (unexpected, before, after)
+            }
+        tree_json = {'name': 'root'}
+        clade_stack.append(tree_json)
+        space = re.compile(r'\s')
+        for char_index in range(len(nwk_str)):
+            try:
+                current_char = nwk_str[char_index]
+                if automaton_state == 0:
+                    # look for the first opening parenthesis
+                    if (current_char == '('):
+                        add_new_tree_level()
+                        automaton_state = 1
+                elif automaton_state == 1 or automaton_state == 3:
+                    # case 1: // name
+                    # case 3: { // branch length
+                    # reading name
+                    if (current_char == ':'):
+                        automaton_state = 3
+                    elif current_char == ',' or current_char == ')':
+                        try:
+                            finish_node_definition()
+                            automaton_state = 1
+                            if (current_char == ','):
+                                add_new_tree_level()
+                        except Exception:
+                            return generate_error(char_index)
+                    elif (current_char == '('):
+                        if len(current_node_name) > 0:
+                            return generate_error(char_index)
+                        else:
+                            add_new_tree_level()
+                    elif (current_char in name_quotes):
+                        if automaton_state == 1 and len(current_node_name) == 0 and len(current_node_attribute) == 0 and len(current_node_annotation) == 0:
+                            automaton_state = 2
+                            quote_delimiter = current_char
+                            continue
+                        return generate_error(char_index)
+                    else:
+                        if (current_char == '['):
+                            if len(current_node_annotation):
+                                return generate_error(char_index)
+                            else:
+                                automaton_state = 4
+                        else:
+                            if (automaton_state == 3):
+                                current_node_attribute += current_char
+                            else:
+                                if (space.search(current_char)):
+                                    continue
+                                if (current_char == ';'):
+                                    char_index = len(nwk_str)
+                                    break
+                                current_node_name += current_char
+                elif automaton_state == 2:
+                    # inside a quoted expression
+                    if (current_char == quote_delimiter):
+                        if (char_index < len(nwk_str - 1)):
+                            if (nwk_str[char_index + 1] == quote_delimiter):
+                                char_index += 1
+                                current_node_name += quote_delimiter
+                                continue
+                            quote_delimiter = 0
+                            automaton_state = 1
+                            continue
+                    else:
+                        current_node_name += current_char
+                elif automaton_state == 4:
+                    # inside a comment / attribute
+                    if (current_char == ']'):
+                        automaton_state = 3
+                    else:
+                        if (current_char == '['):
+                            return generate_error(char_index)
+                        current_node_annotation += current_char
+            except Exception:
+                return generate_error(char_index)
+
+        if (len(clade_stack) != 1):
+            return generate_error(len(nwk_str) - 1)
+
+        if (len(current_node_name)):
+            tree_json['name'] = current_node_name
+
+        return {
+            'json': tree_json,
+            'error': None
+        }
+
+
+if __name__ == '__main__':
+    parser = argparse.ArgumentParser(description='Summarize selection analysis results.')
+    parser.add_argument('--combined', help='Combined reference and query alignment from TN-93', required=False, type=str)
+    parser.add_argument('--pvalue', help='p-value to use', required=False, type=float, default=0.05)
+    parser.add_argument('--gene', help='Name of the gene or sequence being analyzed', required=False, type=str)
+    parser.add_argument('--labels', help='JSON file with labels', required=False, type=str)
+    parser.add_argument('--annotation-output', help='Write a JSON file with site annotations', required=True, type=str)
+    parser.add_argument('--summary-output', help='Write a JSON file here segment annotations', required=True, type=str)
+    parser.add_argument('--annotation-inputs', help='Comma-separated list of site annotation files to merge', required=False, type=str)
+    parser.add_argument('--summary-inputs', help='Comma-separated list of segment annotation files to merge', required=False, type=str)
+    parser.add_argument('--default-tag', help='Default name for sequences that have no explicit label', required=False, type=str, default='Reference')
+    parser.add_argument('--name', help='The sequence ID to highlight', required=False, default='MN908947')
+    parser.add_argument('--mode', help='Operation mode, generate a summary or merge multiple summaries', type=str, choices=['summary', 'merge'], default='summary')
+    parser.add_argument('--relax', help='Path to RELAX.json file', required=False, type=str)
+    parser.add_argument('--busted', help='Path to BUSTED.json file', required=False, type=str)
+    parser.add_argument('--slac', help='Path to SLAC.json file', required=False, type=str)
+    parser.add_argument('--fel', help='Path to FEL.json file', required=False, type=str)
+    parser.add_argument('--cfel', help='Path to CFEL.json file', required=False, type=str)
+    parser.add_argument('--meme', help='Path to MEME.json file', required=False, type=str)
+    parser.add_argument('--meme-full', help='Path to MEME-full.json file', dest='meme_full', required=False, type=str)
+    parser.add_argument('--prime', help='Path to PRIME.json file', required=False, type=str)
+    parser.add_argument('--fade', help='Path to FADE.json file', required=False, type=str)
+    parser.add_argument('--bgm', help='Path to BGM.json file', required=False, type=str)
+    arguments = parser.parse_args()
+    if arguments.mode == 'summary':
+        analyzer = HyPhySummary(arguments)
+        annotation_json, summary_json = analyzer.summary()
+        if annotation_json is not None:
+            with open(arguments.annotation_output, 'w') as fh:
+                json.dump(annotation_json, fh, indent=1)
+        if summary_json is not None:
+            with open(arguments.summary_output, 'w') as fh:
+                json.dump(summary_json, fh, indent=1)
+    else:
+        summary = {}
+        annotation = {}
+        for filename in arguments.annotation_inputs.split(','):
+            with open(filename, 'r') as fh:
+                annotation.update(json.load(fh))
+        for filename in arguments.summary_inputs.split(','):
+            with open(filename, 'r') as fh:
+                summary.update(json.load(fh))
+        with open(arguments.annotation_output, 'w') as fh:
+            json.dump(annotation, fh, indent=1)
+        with open(arguments.summary_output, 'w') as fh:
+            json.dump(summary, fh, indent=1)
+    exit(0)
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summary/ORF6-segment.json	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,7 @@
+{
+ "ORF6": {
+  "map": [],
+  "tree": 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+  "tree_tags": {}
+ }
+}
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summary/ORF6-site.json	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,1 @@
+{}
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summary/ORF6.FADE.json	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,3142 @@
+{
+ "MLE":{
+   "content":{
+     "A":{
+       "0":        [
+[0.8995906688309242, 5.594143577985283, 0.946609453050319, 0.985559664964498],
+        [1.044067957308116, 5.592799085749478, 0.9466955286719859, 0.9872409006967756],
+        [1.036405878450414, 5.592977245431012, 0.9467064115746399, 0.9874538531239992],
+        [1.19730312499705, 5.591581681880384, 0.9467807517201779, 0.9889108417502863],
+        [0.834106476942848, 4.607368577968402, 0.9445445107901261, 0.9467914811705906],
+        [1.594329564126259, 5.58405032798539, 0.9498733406998108, 1.053351676897583],
+        [1.044067957308116, 5.592799085749476, 0.9466955286719857, 0.9872409006967714],
+        [9.963744241830298, 5.54757896832387, 0.949796513525156, 1.051654650196095],
+        [0.8341064769428478, 4.607368577968402, 0.9445445107901261, 0.9467914811705906],
+        [0.8263616796556617, 4.962381890578685, 0.9452991472766892, 0.9606199984313556],
+        [1.355846770273862, 5.587576320848405, 0.9468186115030929, 0.9896544191230371],
+        [2.416879473710861, 6.208129676636089, 0.9501251489404916, 1.0589504906291],
+        [1.40787554952569, 5.591133776748825, 0.9468331097402819, 0.9899394492218799],
+        [1.355846770273861, 5.587576320848404, 0.9468186115030925, 0.9896544191230306],
+        [1.19730312499705, 5.591581681880384, 0.9467807517201781, 0.9889108417502884],
+        [1.19730312499705, 5.591581681880385, 0.9467807517201781, 0.9889108417502884],
+        [1.355846770273861, 5.587576320848404, 0.9468186115030925, 0.9896544191230306],
+        [1.355846770273861, 5.587576320848403, 0.9468186115030925, 0.9896544191230306],
+        [0.8995906688309244, 5.594143577985283, 0.9466094530503192, 0.9855596649645022],
+        [6.422998071838682, 5.459270747984967, 0.9496205809102249, 1.047787992047515],
+        [0.8263616796556618, 4.962381890578685, 0.9452991472766893, 0.9606199984313577],
+        [1.044067957308116, 5.592799085749476, 0.946695528671986, 0.9872409006967778],
+        [1.304863529952144, 5.591532374099517, 0.9468241668256043, 0.9897636163866641],
+        [4.143729167971483, 3.371941711839532, 0.944477923048972, 0.9455893261012084],
+        [1.202763782852373, 5.591329097426113, 0.9467791096500886, 0.9888786149436808],
+        [1.355846770273861, 5.587576320848404, 0.9468186115030928, 0.989654419123035],
+        [0.8429847890446958, 5.594846217874679, 0.9465529865450447, 0.9844596982291083],
+        [1.006307760082907, 5.593130172470984, 0.9466828375359569, 0.9869926752594448],
+        [1.19730312499705, 5.591581681880383, 0.9467807517201781, 0.9889108417502884],
+        [1.087078938485238, 5.592683010775865, 0.9466830109285441, 0.9869960658421052],
+        [0.7517238280995038, 5.596329463811911, 0.9463985197722358, 0.98146252874822],
+        [1.355846770273861, 5.587576320848403, 0.9468186115030928, 0.989654419123035],
+        [1.355846770273862, 5.587576320848407, 0.9468186115030929, 0.9896544191230371],
+        [1.006307760082907, 5.593130172470983, 0.9466828375359569, 0.9869926752594448],
+        [1.19730312499705, 5.591581681880383, 0.9467807517201781, 0.9889108417502884],
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+   "headers":    [
+["rate", "Mean posterior relative rate at a site"],
+    ["bias", "Mean posterior bias parameter at a site"],
+    ["Prob[bias>0]", "Posterior probability of substitution bias"],
+    ["BayesFactor[bias>0]", "Empiricial Bayes Factor for substitution bias"] 
+    ]
+  },
+ "analysis":{
+   "authors":"Sergei L Kosakovsky Pond",
+   "citation":"TBD",
+   "contact":"spond@temple.edu",
+   "info":"FADE (FUBAR Approach to Directional Evolution) is a fast method to test whether or not a subset of sites in a protein alignment\n                            evolve towards a particular residue along a subset of branches at accelerated rates compared to reference model.\n                            FADE uses a random effects model and latent Dirichlet allocation (LDA) - inspired approximation methods to allocate sites to rate classes.",
+   "requirements":"A protein alignment and a **rooted** phylogenetic tree (optionally annotated with {})",
+   "version":"0.2"
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+   "attributes":{
+     "GTR":{
+       "attribute type":"branch length",
+       "display order":0
+      },
+     "original name":{
+       "attribute type":"node label",
+       "display order":-1
+      }
+    }
+  },
+ "data partitions":{
+   "0":{
+     "coverage":      [
+[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60] 
+      ],
+     "name":"fade.filter.default"
+    }
+  },
+ "fits":{
+   "GTR":{
+     "AIC-c":3143.448716087823,
+     "Equilibrium frequencies":      [
+[0.02812268730598148],
+      [0.0009589862341044153],
+      [0.05207996587706627],
+      [0.06500144350472666],
+      [0.09139924401551153],
+      [0.0004994103934165989],
+      [0.03240555513003021],
+      [0.1201895817726986],
+      [0.07393015634302053],
+      [0.1293746899188559],
+      [0.03176385471622648],
+      [0.06739400066565363],
+      [0.02024249929802757],
+      [0.03491854817772569],
+      [0.01970652632127128],
+      [0.0708269268201291],
+      [0.05140999970600156],
+      [0.06918306237396236],
+      [0.008743571808092923],
+      [0.03184928961749697] 
+      ],
+     "Log Likelihood":-981.0326816078039,
+     "Rate Distributions":null,
+     "display order":0,
+     "estimated parameters":560
+    }
+  },
+ "input":{
+   "file name":"/home/aglucaci/SARS-CoV-2/clades/B-1-617/ORF6.aa.fas",
+   "number of sequences":177,
+   "number of sites":61,
+   "partition count":1,
+   "trees":{
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T_HUMAN,GB_MW206535_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_1865_2020_SEGMENT_NULL_HOST_HUMAN)Node342)Node336,((GB_MW583265_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CDC_STM_000001669_2021_SEGMENT_NULL_HOST_HUMAN,GB_MT969697_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC2890_2020_SEGMENT_NULL_HOST_HUMAN)Node346,(GB_MW555931_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S3980_2021_SEGMENT_NULL_HOST_HUMAN,GB_MW566557_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_TX_QDX_4471_2020_SEGMENT_NULL_HOST_HUMAN)Node349)Node345)Node335)Node327)Node1,REFERENCE)"
+    }
+  },
+ "settings":{
+   "bayes factor":100,
+   "burn-in":1000000,
+   "chain-length":2000000,
+   "chains":1,
+   "concentration":0.5,
+   "grid size":20,
+   "method":"Variational-Bayes",
+   "samples":100
+  },
+ "site annotations":{
+   "headers":{
+     "Composition":"Amino acid composition of site",
+     "Substitutions":"Substitution history on selected branches"
+    },
+   "site annotations":{
+     "0":      [
+["M12", ""],
+      ["F12", ""],
+      ["H12", ""],
+      ["L12", ""],
+      ["V12", ""],
+      ["D11,G1", "D->G(1)"],
+      ["F12", ""],
+      ["H1,Q11", "Q->H(1)"],
+      ["V12", ""],
+      ["T12", ""],
+      ["I12", ""],
+      ["A12", ""],
+      ["E12", ""],
+      ["I12", ""],
+      ["L12", ""],
+      ["L12", ""],
+      ["I12", ""],
+      ["I12", ""],
+      ["M12", ""],
+      ["K1,R10,S1", "R->K(1)S(1)"],
+      ["T12", ""],
+      ["F12", ""],
+      ["K12", ""],
+      ["F1,V11", "V->F(1)"],
+      ["S12", ""],
+      ["I12", ""],
+      ["W12", ""],
+      ["N12", ""],
+      ["L12", ""],
+      ["D12", ""],
+      ["Y12", ""],
+      ["I12", ""],
+      ["I11,T1", ""],
+      ["N12", ""],
+      ["L12", ""],
+      ["I12", ""],
+      ["I12", ""],
+      ["K12", ""],
+      ["N12", ""],
+      ["L12", ""],
+      ["F1,S11", "C->F(1)"],
+      ["K12", ""],
+      ["S12", ""],
+      ["L12", ""],
+      ["T12", ""],
+      ["E12", ""],
+      ["N12", ""],
+      ["K12", ""],
+      ["Y12", ""],
+      ["S12", ""],
+      ["Q12", ""],
+      ["L12", ""],
+      ["D12", ""],
+      ["E12", ""],
+      ["E12", ""],
+      ["Q12", ""],
+      ["L1,P11", "P->L(1)"],
+      ["M12", ""],
+      ["E12", ""],
+      ["I12", ""],
+      ["C1,D11", "Y->C(1)"] 
+      ]
+    }
+  },
+ "tested":{
+   "0":{
+     "EPI_ISL_1181694_HCOV_19_USA_DE_DHSS_B1064373_2021":"test",
+     "EPI_ISL_1284652_HCOV_19_GERMANY_SN_RKI_I_038291_2021":"test",
+     "EPI_ISL_1442952_HCOV_19_SINGAPORE_321_2021":"test",
+     "EPI_ISL_1470937_HCOV_19_USA_NY_PRL_2021_03_29_01C17_2021":"test",
+     "EPI_ISL_1512225_HCOV_19_USA_GA_CDC_STM_000041012_2021":"test",
+     "EPI_ISL_1516887_HCOV_19_AUSTRALIA_QLD1826_2021":"test",
+     "EPI_ISL_1533793_HCOV_19_INDIA_MH_NCCS_CHN21027888_2021":"test",
+     "EPI_ISL_1533799_HCOV_19_INDIA_MH_NCCS_9947_2021":"test",
+     "EPI_ISL_1543980_HCOV_19_SINGAPORE_490_2021":"test",
+     "EPI_ISL_1589923_HCOV_19_INDIA_WB_1930300571091_2021":"test",
+     "EPI_ISL_1589926_HCOV_19_INDIA_WB_1930300586246_2021":"test",
+     "EPI_ISL_1631286_HCOV_19_ENGLAND_CAMC_14E7527_2021":"test",
+     "GB_LC571023_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_DP0724_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT326182_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CT_UW_1365_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT358638_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_DEU_FFM1_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT359866_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_ESP_VH198152683_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT447156_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_THA_SI200383_NT_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT449654_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_1063_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT451104_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC203_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT520188_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MA_MGH_00184_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT520493_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MA_MGH_00316_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT601276_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BGD_BCSIR_NILMRC_52_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT601281_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BGD_BCSIR_NILMRC_67_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT612186_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC1576_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT627613_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S260_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT631787_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_1651_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT641697_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC595_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT683417_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_UW_10131_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT706153_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WI_UW_32_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT745697_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC2124_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT745746_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_SA01_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT750335_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_1794_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT772447_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_IL_UW_670_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT782360_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_UT_04172_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT811295_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_SEARCH_0657_IPL_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT811511_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_SEARCH_1079_SAN_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT811669_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_SEARCH_0155_NBG_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT825091_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_IRN_COVID19_IRVSH1_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT834049_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S1626_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT847221_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BGD_BCSIR_NILMRC_283_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT860680_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BGD_DNAS_DRICM_ISL_MH_09_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT873189_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MA_DPH_00301_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT890240_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_GHA_2709_S25_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT913013_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BGD_DNAS_DRICM_ISL_SHARMIN_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT940460_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_IND_GBRC331_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT940472_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_IND_GBRC334A_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT946870_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S2716_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT969697_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC2890_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MT973414_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_TAS83_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW035934_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_2214_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW047313_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WRCEVA_000509_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW056168_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_1521_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW064840_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MI_QDX_825_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW064863_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WI_QDX_779_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW093451_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_TX_DSHS_0533_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW134116_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_3258_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW134227_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_3762_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW154346_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC7465_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW154411_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC6964_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW155278_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC12385_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW155387_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC13741_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW155642_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC13394_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW155738_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC11358_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW155761_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC10624_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW156645_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC11076_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW156732_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC10631_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW156840_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC11409_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW156971_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC10203_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW157056_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC11469_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW181508_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_UT_UPHL_201017695_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW181734_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HOMO_SAPIENS_HKG_CASE5054_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW181739_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HOMO_SAPIENS_HKG_CASE5119_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW190571_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_UT_QDX_1809_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW193966_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_IND_NIMH_12171_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW206535_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_1865_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW208032_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_VA_DCLS_1590_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW243997_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MD_MDH_0302_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW244002_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MD_MDH_0307_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW265628_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_UT_UPHL_201129040_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW277035_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC16243_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW295643_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_TUN_TUN_202058412_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW306356_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_12795_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW321239_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC17424_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW321253_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_AUS_VIC17363_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW332559_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_BHR_341036734_S5_L001_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW341989_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WI_UW_2124_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW375980_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_UT_UPHL_201216229_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW406537_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_IN_CDC_2_3693679_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW420890_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_NMDOH_2020316507_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW433771_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_LACPHL_AF00076_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW435625_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_TX_DSHS_1968_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW447630_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_PAK_JRCGR_KHI15_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW452545_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_TUN_TUN_ADAGE_T_15425_20_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW462661_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_MN_MDH_2263_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW467476_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_EGY_EGY_CCHE57357_A_71_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW467498_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_EGY_EGY_CCHE57357_P_32_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW474247_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S3080_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW483544_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_13396_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW483548_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CA_CZB_13407_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW486406_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WI_UW_2638_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW490743_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_2463_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW490862_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_2441_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW490888_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_2295_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW490946_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_2353_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW491211_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_FL_BPHL_2755_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW493999_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_WA_S3367_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW494387_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_NH_CDC_STM_A100009_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW505295_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_TX_QDX_3142_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW509810_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_EGY_CUNCI_HGC11I035_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW518151_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_IN_CDC_STM_A008_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW519641_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_CT_CDC_STM_A100453_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW519702_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_IN_CDC_STM_A100466_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW519849_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_PA_CDC_STM_A100104_2021_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW521749_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_NV_QDX_3543_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW521810_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_TX_QDX_3530_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW523039_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_GA_GPHL_0001_2020_SEGMENT_NULL_HOST_HUMAN":"background",
+     "GB_MW524907_ORGANISM_SEVERE_ACUTE_RESPIRATORY_SYNDROME_CORONAVIRUS_2_STRAIN_NAME_SARS_COV_2_HUMAN_USA_RI_CDC_STM_0000013_C05_2021_SEGMENT_NULL_HOST_HUMAN":"background",
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+   "Residue A analysis":{
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+     "timer":6
+    },
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+     "timer":5
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+     "order":21,
+     "timer":5
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+     "timer":6
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+     "order":21,
+     "timer":5
+    },
+   "Residue N analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue P analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue Q analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue R analysis":{
+     "order":21,
+     "timer":6
+    },
+   "Residue S analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue T analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue V analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue W analysis":{
+     "order":21,
+     "timer":5
+    },
+   "Residue Y analysis":{
+     "order":21,
+     "timer":5
+    }
+  }
+}
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summary/ORF6.MEME-full.json	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,2444 @@
+{
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+      [0, 0, 0.8, 0, 0.2, 0, 0.6666666666666666, 0, 0, -17.66010584477118, -17.66010584477118],
+      [1.582609657659543, 0.07748016346540233, 1e-08, 13.27219264690008, 0.9999999899999999, 3.752752164229889, 0.07196902171856812, 2, 0, -34.06058348245836, -34.06125069473573],
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+      [0, 0, 1e-08, 10.15334067075988, 0.9999999899999999, 5.17018279350712, 0.03453604200412042, 1, 0, -15.66593469453643, -15.66609055380208],
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+      [0, 0, 0.8, 0, 0.2, 0, 0.6666666666666666, 0, 0, -16.61540439906428, -16.61540439906428],
+      [30.1118279159421, 0, 1, 0.957598139734009, 0, 0, 0.6666666666666666, 0, 0, -34.52230675976102, -34.52230675976102],
+      [1.9537851141012, 0, 1, 3.892151132092624, 0, 0, 0.6666666666666666, 0, 0, -16.46478282393715, -16.46478282393715],
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+      [1.953310497214501, 0, 1, 3.891048374461244, 0, 0, 0.6666666666666666, 0, 0, -23.1486449234974, -23.1486449234974],
+      [1.077358264752097, 0, 1, 1.936877407404742, 0, 0, 0.6666666666666666, 0, 0, -30.49557060864319, -30.49551277592488],
+      [0.4180911660685708, 0, 1, 0.7640377810705596, 0, 0, 0.6666666666666666, 0, 0, -28.21300164824159, -28.21297701245718],
+      [3.104043274364678, 0, 1, 6.555883262916113, 0, 0, 0.6666666666666666, 0, 0, -16.14313820166806, -16.14274810668686],
+      [0, 0, 0.75, 0, 0.25, 0, 0.6666666666666666, 0, 0, -19.49920248613907, -19.49920248613907],
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+      [0, 0, 0.7912347256616403, 0, 0.2087652743383597, 0, 0.6666666666666666, 0, 0, -22.19916691267966, -22.1991532842849],
+      [1.534074089513757, 0, 1, 2.769609925253198, 0, 0, 0.6666666666666666, 0, 0, -16.77510391333195, -16.77509276696067],
+      [0, 0, 0.75, 0, 0.25, 0, 0.6666666666666666, 0, 0, -17.01000957763659, -17.01000957763659],
+      [0, 0, 0.8, 0, 0.2, 0, 0.6666666666666666, 0, 0, -26.96319496447656, -26.96319496447656],
+      [1.472776239113225, 0, 1, 2.822518934996388, 0, 0, 0.6666666666666666, 0, 0, -21.66317070161482, -21.66317070161482],
+      [0.7810807765132048, 0, 1, 1.467068573878717, 0, 0, 0.6666666666666666, 0, 0, -41.97202369362519, -41.97194251016953],
+      [0.9998933458018572, 0, 1, 1.856933903889356, 0, 0, 0.6666666666666666, 0, 0, -18.21839894965076, -18.21839894965076],
+      [1.048951268854049, 0, 1, 1.875054250124991, 0, 0, 0.6666666666666666, 0, 0, -17.13748436658455, -17.13731360970737],
+      [1.145142543396571, 0, 1, 1.717713815094857, 0, 0, 0.6666666666666666, 0, 0, -32.79717005038975, -32.79717005038975],
+      [0.7937041891709178, 0, 1, 1.190556283756377, 0, 0, 0.6666666666666666, 0, 0, -36.08746985243199, -36.08746985243199],
+      [0, 0, 0.7903808137320004, 0, 0.2096191862679996, 0, 0.6666666666666666, 0, 0, -13.57310028306451, -13.57305481688544],
+      [2.072495785393385, 0, 1, 3.861458808968248, 0, 0, 0.6666666666666666, 0, 0, -30.97797429576041, -30.9773528105636],
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+      [2.077042318198285, 0, 1, 3.115563477297425, 0, 0, 0.6666666666666666, 0, 0, -29.14287644332952, -29.14287644332952],
+      [1.739182016266482, 0, 1, 3.40329821528515, 0, 0, 0.6666666666666666, 0, 0, -30.14121908905283, -30.14121908905283],
+      [1.764885373886822, 0, 1, 2.647328060830233, 0, 0, 0.6666666666666666, 0, 0, -18.38577160288595, -18.38577160288595],
+      [1.594981255106882, 0, 1, 3.08546275964849, 0, 0, 0.6666666666666666, 0, 0, -15.71145902077582, -15.71145902077582],
+      [2.057945950529143, 0, 1, 4.372833443488771, 0, 0, 0.6666666666666666, 0, 0, -35.39618855056842, -35.39615151411893],
+      [1.742964279641046, 0, 1, 2.614446419461568, 0, 0, 0.6666666666666666, 0, 0, -16.48592399103254, -16.48592399103254],
+      [0, 0, 0.75, 0, 0.25, 0, 0.6666666666666666, 0, 0, -11.20581790886153, -11.20581790886153],
+      [1.764885373886822, 0, 1, 2.647328060830233, 0, 0, 0.6666666666666666, 0, 0, -18.38547425624006, -18.38547425624006],
+      [1.174712347115085, 0.6460917909132968, 0.5, 13.82805811887346, 0.5, 1.354798676662341, 0.259575576702714, 0, 0, -16.83642552319799, -16.83571864929129],
+      [0, 0, 0.8, 0, 0.2, 0, 0.6666666666666666, 0, 0, -25.32868326473937, -25.32868326473937],
+      [0, 0, 0.7896119483012403, 0, 0.2103880516987597, 0, 0.6666666666666666, 0, 0, -19.28596658295836, -19.28592846913741],
+      [1.64889108952605, 0, 1, 20.6592188738145, 0, 0, 0.6666666666666666, 0, 0, -29.02753866207943, -28.98810322873465],
+      [3.654796806020539, 0.127573015292616, 1e-08, 9.215175670578597, 0.9999999899999999, 0.4416499742048643, 0.4459123814638887, 0, 0, -66.77406875364495, -66.77540343038319] 
+      ]
+    },
+   "headers":    [
+["alpha;", "Synonymous substitution rate at a site"],
+    ["&beta;<sup>-</sup>", "Non-synonymous substitution rate at a site for the negative/neutral evolution component"],
+    ["p<sup>-</sup>", "Mixture distribution weight allocated to &beta;<sup>-</sup>; loosely -- the proportion of the tree evolving neutrally or under negative selection"],
+    ["&beta;<sup>+</sup>", "Non-synonymous substitution rate at a site for the positive/neutral evolution component"],
+    ["p<sup>+</sup>", "Mixture distribution weight allocated to &beta;<sup>+</sup>; loosely -- the proportion of the tree evolving neutrally or under positive selection"],
+    ["LRT", "Likelihood ratio test statistic for episodic diversification, i.e., p<sup>+</sup> &gt; 0 <emph>and<emph> &beta;<sup>+</sup> &gt; &alpha;"],
+    ["p-value", "Asymptotic p-value for episodic diversification, i.e., p<sup>+</sup> &gt; 0 <emph>and<emph> &beta;<sup>+</sup> &gt; &alpha;"],
+    ["# branches under selection", "The (very approximate and rough) estimate of how many branches may have been under selection at this site, i.e., had an empirical Bayes factor of 100 or more for the &beta;<sup>+</sup> rate"],
+    ["Total branch length", "The total length of branches contributing to inference at this site, and used to scale dN-dS"],
+    ["MEME LogL", "Site Log-likelihood under the MEME model"],
+    ["FEL LogL", "Site Log-likelihood under the FEL model"] 
+    ]
+  },
+ "analysis":{
+   "authors":"Sergei L. Kosakovsky Pond, Steven Weaver",
+   "citation":"Detecting Individual Sites Subject to Episodic Diversifying Selection. _PLoS Genet_ 8(7): e1002764.",
+   "contact":"spond@temple.edu",
+   "info":"MEME (Mixed Effects Model of Evolution)\n    estimates a site-wise synonymous (&alpha;) and a two-category mixture of non-synonymous\n    (&beta;-, with proportion p-, and &beta;+ with proportion [1-p-]) rates, and\n    uses a likelihood ratio test to determine if &beta;+ > &alpha; at a site.\n    The estimates aggregate information over a proportion of branches at a site,\n    so the signal is derived from\n    episodic diversification, which is a combination of strength of selection [effect size] and\n    the proportion of the tree affected. A subset of branches can be selected\n    for testing as well, in which case an additional (nuisance) parameter will be\n    inferred -- the non-synonymous rate on branches NOT selected for testing. Multiple partitions within a NEXUS file are also supported\n    for recombination - aware analysis.\n    ",
+   "requirements":"in-frame codon alignment and a phylogenetic tree",
+   "version":"2.1.2"
+  },
+ "branch attributes":{
+   "0":{
+     "Node100":{
+       "Global MG94xREV":0.005595771389995104,
+       "Nucleotide GTR":0.005480709230504446
+      },
+     "Node112":{
+       "Global MG94xREV":0.005601039668885619,
+       "Nucleotide GTR":0.005479616709115599
+      },
+     "Node115":{
+       "Global MG94xREV":0.005593919439547744,
+       "Nucleotide GTR":0.0054731375250642
+      },
+     "Node119":{
+       "Global MG94xREV":0.00560632712449723,
+       "Nucleotide GTR":0.00547792745634657
+      },
+     "Node172":{
+       "Global MG94xREV":0.005628805315829838,
+       "Nucleotide GTR":0.005503005696410831
+      },
+     "Node177":{
+       "Global MG94xREV":0.005582953695602026,
+       "Nucleotide GTR":0.005475013711016215
+      },
+     "Node184":{
+       "Global MG94xREV":0.005597986108256508,
+       "Nucleotide GTR":0.005474986566233221
+      },
+     "Node194":{
+       "Global MG94xREV":0.005557725672243263,
+       "Nucleotide GTR":0.005498938135253649
+      },
+     "Node198":{
+       "Global MG94xREV":0.005634884025943302,
+       "Nucleotide GTR":0.005501809093221373
+      },
+     "Node201":{
+       "Global MG94xREV":0.005588355805518057,
+       "Nucleotide GTR":0.005472956903151315
+      },
+     "Node206":{
+       "Global MG94xREV":0.005633043010542594,
+       "Nucleotide GTR":0.005501897571553138
+      },
+     "Node22":{
+       "Global MG94xREV":0.00559543975008409,
+       "Nucleotide GTR":0.005478062261613842
+      },
+     "Node226":{
+       "Global MG94xREV":0.005594745879060948,
+       "Nucleotide GTR":0.005477381989095749
+      },
+     "Node23":{
+       "Global MG94xREV":0.005618936547133832,
+       "Nucleotide GTR":0.005488116513150291
+      },
+     "Node230":{
+       "Global MG94xREV":0.005586715402818173,
+       "Nucleotide GTR":0.005473152410546898
+      },
+     "Node231":{
+       "Global MG94xREV":0.005573476299199454,
+       "Nucleotide GTR":0.00547159778188338
+      },
+     "Node241":{
+       "Global MG94xREV":0.005574017914032298,
+       "Nucleotide GTR":0.005477798883065424
+      },
+     "Node244":{
+       "Global MG94xREV":0.005631564868149991,
+       "Nucleotide GTR":0.005496518997143121
+      },
+     "Node245":{
+       "Global MG94xREV":0.005641860930043722,
+       "Nucleotide GTR":0.005506569154539385
+      },
+     "Node252":{
+       "Global MG94xREV":0.00560624499024505,
+       "Nucleotide GTR":0.005473441512665834
+      },
+     "Node258":{
+       "Global MG94xREV":0.005593444524683299,
+       "Nucleotide GTR":0.005476107754690567
+      },
+     "Node260":{
+       "Global MG94xREV":0.005565348761454758,
+       "Nucleotide GTR":0.005473521582621392
+      },
+     "Node264":{
+       "Global MG94xREV":0.005591115364672502,
+       "Nucleotide GTR":0.005477788257690359
+      },
+     "Node283":{
+       "Global MG94xREV":0.005594706943380021,
+       "Nucleotide GTR":0.005469663035826517
+      },
+     "Node290":{
+       "Global MG94xREV":0.005591076424420491,
+       "Nucleotide GTR":0.005476109506909777
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+     "Node292":{
+       "Global MG94xREV":0.005558180634830368,
+       "Nucleotide GTR":0.00544551398387603
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+     "Node319":{
+       "Global MG94xREV":0.00563326530258351,
+       "Nucleotide GTR":0.005502113700459953
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+     "Node324":{
+       "Global MG94xREV":0.005598370791462457,
+       "Nucleotide GTR":0.005469663035826517
+      },
+     "Node33":{
+       "Global MG94xREV":0.01144771036237505,
+       "Nucleotide GTR":0.01128011002024621
+      },
+     "Node332":{
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+       "Nucleotide GTR":0.005502622770837013
+      },
+     "Node338":{
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+       "Nucleotide GTR":0.005472031927624566
+      },
+     "Node342":{
+       "Global MG94xREV":0.005328188042910753,
+       "Nucleotide GTR":0.005562711868274484
+      },
+     "Node36":{
+       "Global MG94xREV":0.005558675481948862,
+       "Nucleotide GTR":0.005448117572784753
+      },
+     "Node57":{
+       "Global MG94xREV":0.005626413560011556,
+       "Nucleotide GTR":0.005500667654720326
+      },
+     "Node62":{
+       "Global MG94xREV":0.005630263317610192,
+       "Nucleotide GTR":0.005504431400115917
+      },
+     "Node71":{
+       "Global MG94xREV":0.005602517327407453,
+       "Nucleotide GTR":0.00547942112606274
+      },
+     "REFERENCE":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"REFERENCE"
+      },
+     "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.9999999949752406,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.9999999949752406,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":1,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.9999999949752406,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.9999999949752406,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.9999999999999991,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"epi_isl_1181694/hCoV-19/USA/DE-DHSS-B1064373/2021"
+      },
+     "epi_isl_1284652_hCoV_19_Germany_SN_RKI_I_038291_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.9999999949752406,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.9999999949752406,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":1,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.9999999949752406,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.9999999949752406,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.9999999999999991,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"epi_isl_1284652/hCoV-19/Germany/SN-RKI-I-038291/2021"
+      },
+     "epi_isl_1442952_hCoV_19_Singapore_321_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.7924501600081628,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8900931116034067,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.799697493058076,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":461.6567068474511,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8928090823811641,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8943371363028002,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.00553488916724749,
+       "Nucleotide GTR":0.00546921831544746,
+       "original name":"epi_isl_1442952/hCoV-19/Singapore/321/2021"
+      },
+     "epi_isl_1470937_hCoV_19_USA_NY_PRL_2021_03_29_01C17_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.9999999949752406,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.9999999949752406,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":1,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.9999999949752406,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.9999999949752406,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.9999999999999991,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"epi_isl_1470937/hCoV-19/USA/NY-PRL-2021_03_29_01C17/2021"
+      },
+     "epi_isl_1512225_hCoV_19_USA_GA_CDC_STM_000041012_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":136.5728707742264,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8895065117312027,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.7986850585433725,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8945924492155995,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8922331808168864,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8937678138750423,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005566795318472669,
+       "Nucleotide GTR":0.005503965503765864,
+       "original name":"epi_isl_1512225/hCoV-19/USA/GA-CDC-STM-000041012/2021"
+      },
+     "epi_isl_1516887_hCoV_19_Australia_QLD1826_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.7917775131592643,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8897178074088927,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.7990496995358782,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8947963102057936,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.892440645428014,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":1e+26,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005555298511512746,
+       "Nucleotide GTR":0.005498039815669468,
+       "original name":"epi_isl_1516887/hCoV-19/Australia/QLD1826/2021"
+      },
+     "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.6291705473788498,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.79442293316179,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.6428154940083556,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8019499473123111,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":57.84781194229306,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8006716128313811,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.01113813594378592,
+       "Nucleotide GTR":0.0110000847666501,
+       "original name":"epi_isl_1533793/hCoV-19/India/MH-NCCS-CHN21027888/2021"
+      },
+     "epi_isl_1533799_hCoV_19_India_MH_NCCS_9947_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.7923190323921318,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8900199531805481,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.7995712142761719,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8950877636829533,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8927372730260545,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8942661479865357,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005538866193038189,
+       "Nucleotide GTR":0.005476577087719768,
+       "original name":"epi_isl_1533799/hCoV-19/India/MH-NCCS-9947/2021"
+      },
+     "epi_isl_1543980_hCoV_19_Singapore_490_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.9999999949752406,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.9999999949752406,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":1,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.9999999949752406,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.9999999949752406,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.9999999999999991,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"epi_isl_1543980/hCoV-19/Singapore/490/2021"
+      },
+     "epi_isl_1589923_hCoV_19_India_WB_1930300571091_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":143.5574973412974,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8891134287605834,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.7980069753246345,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8942132176984796,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8918472482554552,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8933862811544688,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005588190889382373,
+       "Nucleotide GTR":0.005503865773038113,
+       "original name":"epi_isl_1589923/hCoV-19/India/WB-1930300571091/2021"
+      },
+     "epi_isl_1589926_hCoV_19_India_WB_1930300586246_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.7913406033312775,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":1e+26,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":0.7986289437851897,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8945610771453527,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8922012581491121,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8937362470345004,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005568565107944807,
+       "Nucleotide GTR":0.005501881860632767,
+       "original name":"epi_isl_1589926/hCoV-19/India/WB-1930300586246/2021"
+      },
+     "epi_isl_1631286_hCoV_19_England_CAMC_14E7527_2021":{
+       "EBF site 1 (partition 1)":1,
+       "EBF site 10 (partition 1)":1,
+       "EBF site 11 (partition 1)":1,
+       "EBF site 12 (partition 1)":1,
+       "EBF site 13 (partition 1)":1,
+       "EBF site 14 (partition 1)":1,
+       "EBF site 15 (partition 1)":1,
+       "EBF site 16 (partition 1)":1,
+       "EBF site 17 (partition 1)":1,
+       "EBF site 18 (partition 1)":1,
+       "EBF site 19 (partition 1)":1,
+       "EBF site 2 (partition 1)":1,
+       "EBF site 20 (partition 1)":0.7910714200449187,
+       "EBF site 21 (partition 1)":1,
+       "EBF site 22 (partition 1)":1,
+       "EBF site 24 (partition 1)":0.8893237211020406,
+       "EBF site 25 (partition 1)":1,
+       "EBF site 26 (partition 1)":1,
+       "EBF site 27 (partition 1)":1,
+       "EBF site 28 (partition 1)":1,
+       "EBF site 29 (partition 1)":1,
+       "EBF site 3 (partition 1)":1,
+       "EBF site 30 (partition 1)":1,
+       "EBF site 31 (partition 1)":1,
+       "EBF site 32 (partition 1)":1,
+       "EBF site 33 (partition 1)":1,
+       "EBF site 34 (partition 1)":1,
+       "EBF site 35 (partition 1)":1,
+       "EBF site 36 (partition 1)":1,
+       "EBF site 37 (partition 1)":1,
+       "EBF site 38 (partition 1)":1,
+       "EBF site 39 (partition 1)":1,
+       "EBF site 4 (partition 1)":1,
+       "EBF site 40 (partition 1)":1,
+       "EBF site 41 (partition 1)":1,
+       "EBF site 42 (partition 1)":1,
+       "EBF site 43 (partition 1)":1,
+       "EBF site 44 (partition 1)":1,
+       "EBF site 45 (partition 1)":1,
+       "EBF site 46 (partition 1)":1,
+       "EBF site 47 (partition 1)":1,
+       "EBF site 48 (partition 1)":1,
+       "EBF site 49 (partition 1)":1,
+       "EBF site 5 (partition 1)":1,
+       "EBF site 50 (partition 1)":1,
+       "EBF site 51 (partition 1)":1,
+       "EBF site 52 (partition 1)":1,
+       "EBF site 53 (partition 1)":1,
+       "EBF site 54 (partition 1)":1,
+       "EBF site 55 (partition 1)":1,
+       "EBF site 56 (partition 1)":1,
+       "EBF site 57 (partition 1)":18.39195605031884,
+       "EBF site 58 (partition 1)":1,
+       "EBF site 59 (partition 1)":1,
+       "EBF site 6 (partition 1)":0.8944161065245172,
+       "EBF site 60 (partition 1)":1,
+       "EBF site 61 (partition 1)":0.8920537294490001,
+       "EBF site 7 (partition 1)":1,
+       "EBF site 8 (partition 1)":0.8935904002586167,
+       "EBF site 9 (partition 1)":1,
+       "Global MG94xREV":0.005576742951974244,
+       "Nucleotide GTR":0.005501706304611714,
+       "original name":"epi_isl_1631286/hCoV-19/England/CAMC-14E7527/2021"
+      },
+     "gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005625443729561243,
+       "Nucleotide GTR":0.005503988159180567,
+       "original name":"gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human"
+      },
+     "gb_MT326182_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_UW_1365_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00570992284952657,
+       "Nucleotide GTR":0.005541311472381236,
+       "original name":"gb_MT326182_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_UW_1365_2020_Segment_null_Host_Human"
+      },
+     "gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005591786722003633,
+       "Nucleotide GTR":0.005474004903669556,
+       "original name":"gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human"
+      },
+     "gb_MT359866_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ESP_VH198152683_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005589919271399852,
+       "Nucleotide GTR":0.005469223246210523,
+       "original name":"gb_MT359866_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ESP_VH198152683_2020_Segment_null_Host_Human"
+      },
+     "gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594417293215322,
+       "Nucleotide GTR":0.005477059841797375,
+       "original name":"gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human"
+      },
+     "gb_MT449654_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1063_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT449654_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1063_2020_Segment_null_Host_Human"
+      },
+     "gb_MT451104_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC203_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT451104_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC203_2020_Segment_null_Host_Human"
+      },
+     "gb_MT520188_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00184_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005643836997888733,
+       "Nucleotide GTR":0.005513415162685614,
+       "original name":"gb_MT520188_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00184_2020_Segment_null_Host_Human"
+      },
+     "gb_MT520493_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00316_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT520493_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00316_2020_Segment_null_Host_Human"
+      },
+     "gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005591410289624195,
+       "Nucleotide GTR":0.005472320917083399,
+       "original name":"gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human"
+      },
+     "gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005699222841336904,
+       "Nucleotide GTR":0.005541174876424373,
+       "original name":"gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human"
+      },
+     "gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005585829046704516,
+       "Nucleotide GTR":0.005477834152100824,
+       "original name":"gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human"
+      },
+     "gb_MT627613_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S260_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT627613_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S260_2020_Segment_null_Host_Human"
+      },
+     "gb_MT631787_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1651_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005714644211461833,
+       "Nucleotide GTR":0.005548568325838462,
+       "original name":"gb_MT631787_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1651_2020_Segment_null_Host_Human"
+      },
+     "gb_MT641697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC595_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT641697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC595_2020_Segment_null_Host_Human"
+      },
+     "gb_MT683417_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_10131_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005593469729805412,
+       "Nucleotide GTR":0.005474004634873228,
+       "original name":"gb_MT683417_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_UW_10131_2020_Segment_null_Host_Human"
+      },
+     "gb_MT706153_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_32_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005577547296049738,
+       "Nucleotide GTR":0.005469223246210523,
+       "original name":"gb_MT706153_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_32_2020_Segment_null_Host_Human"
+      },
+     "gb_MT745697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2124_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005628430185021072,
+       "Nucleotide GTR":0.005503961533125481,
+       "original name":"gb_MT745697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2124_2020_Segment_null_Host_Human"
+      },
+     "gb_MT745746_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_SA01_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005595427368373432,
+       "Nucleotide GTR":0.005472484462350333,
+       "original name":"gb_MT745746_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_SA01_2020_Segment_null_Host_Human"
+      },
+     "gb_MT750335_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1794_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005624635325623979,
+       "Nucleotide GTR":0.005504845328896214,
+       "original name":"gb_MT750335_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1794_2020_Segment_null_Host_Human"
+      },
+     "gb_MT772447_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_UW_670_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005606808725804134,
+       "Nucleotide GTR":0.005476520487977195,
+       "original name":"gb_MT772447_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_UW_670_2020_Segment_null_Host_Human"
+      },
+     "gb_MT782360_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_04172_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT782360_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_04172_2020_Segment_null_Host_Human"
+      },
+     "gb_MT811295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0657_IPL_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005602779414095357,
+       "Nucleotide GTR":0.005483116643606682,
+       "original name":"gb_MT811295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0657_IPL_2020_Segment_null_Host_Human"
+      },
+     "gb_MT811511_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_1079_SAN_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594934428031569,
+       "Nucleotide GTR":0.005477759479364592,
+       "original name":"gb_MT811511_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_1079_SAN_2020_Segment_null_Host_Human"
+      },
+     "gb_MT811669_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0155_NBG_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005608438497572238,
+       "Nucleotide GTR":0.005479500974163274,
+       "original name":"gb_MT811669_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0155_NBG_2020_Segment_null_Host_Human"
+      },
+     "gb_MT825091_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IRN_COVID19_IRVSH1_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005707279732364202,
+       "Nucleotide GTR":0.005548680261509582,
+       "original name":"gb_MT825091_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IRN_COVID19_IRVSH1_2020_Segment_null_Host_Human"
+      },
+     "gb_MT834049_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S1626_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005606583852762365,
+       "Nucleotide GTR":0.005476300932011254,
+       "original name":"gb_MT834049_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S1626_2020_Segment_null_Host_Human"
+      },
+     "gb_MT847221_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_283_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005633795125983258,
+       "Nucleotide GTR":0.005500744984499848,
+       "original name":"gb_MT847221_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_283_2020_Segment_null_Host_Human"
+      },
+     "gb_MT860680_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_MH_09_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MT860680_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_MH_09_2020_Segment_null_Host_Human"
+      },
+     "gb_MT873189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_DPH_00301_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00559938664140668,
+       "Nucleotide GTR":0.005504877668596932,
+       "original name":"gb_MT873189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_DPH_00301_2020_Segment_null_Host_Human"
+      },
+     "gb_MT890240_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_2709_S25_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631622830079517,
+       "Nucleotide GTR":0.00550789288743052,
+       "original name":"gb_MT890240_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_2709_S25_2020_Segment_null_Host_Human"
+      },
+     "gb_MT913013_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_Sharmin_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005620583336796804,
+       "Nucleotide GTR":0.005502683897463829,
+       "original name":"gb_MT913013_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_DNAS_DRICM_isl_Sharmin_2020_Segment_null_Host_Human"
+      },
+     "gb_MT940460_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC331_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631429256778813,
+       "Nucleotide GTR":0.005501967924009293,
+       "original name":"gb_MT940460_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC331_2020_Segment_null_Host_Human"
+      },
+     "gb_MT940472_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC334a_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005558872800771559,
+       "Nucleotide GTR":0.005447824378065953,
+       "original name":"gb_MT940472_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_GBRC334a_2020_Segment_null_Host_Human"
+      },
+     "gb_MT946870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S2716_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005606801741396091,
+       "Nucleotide GTR":0.005479358689431805,
+       "original name":"gb_MT946870_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S2716_2020_Segment_null_Host_Human"
+      },
+     "gb_MT969697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2890_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631797260719136,
+       "Nucleotide GTR":0.005545318968958342,
+       "original name":"gb_MT969697_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC2890_2020_Segment_null_Host_Human"
+      },
+     "gb_MT973414_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_TAS83_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005573726843146466,
+       "Nucleotide GTR":0.00550059729577716,
+       "original name":"gb_MT973414_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_TAS83_2020_Segment_null_Host_Human"
+      },
+     "gb_MW035934_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_2214_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005591361028022017,
+       "Nucleotide GTR":0.005472272548333728,
+       "original name":"gb_MW035934_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_2214_2020_Segment_null_Host_Human"
+      },
+     "gb_MW047313_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WRCEVA_000509_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005593741820197527,
+       "Nucleotide GTR":0.005475919308972768,
+       "original name":"gb_MW047313_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WRCEVA_000509_2020_Segment_null_Host_Human"
+      },
+     "gb_MW056168_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1521_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW056168_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1521_2020_Segment_null_Host_Human"
+      },
+     "gb_MW064840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_QDX_825_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005590314811331633,
+       "Nucleotide GTR":0.005468319661672707,
+       "original name":"gb_MW064840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MI_QDX_825_2020_Segment_null_Host_Human"
+      },
+     "gb_MW064863_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_QDX_779_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005705433630317571,
+       "Nucleotide GTR":0.005541780329492433,
+       "original name":"gb_MW064863_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_QDX_779_2020_Segment_null_Host_Human"
+      },
+     "gb_MW093451_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_0533_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00558167691796866,
+       "Nucleotide GTR":0.005473273369957197,
+       "original name":"gb_MW093451_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_0533_2020_Segment_null_Host_Human"
+      },
+     "gb_MW134116_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3258_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005620053150521703,
+       "Nucleotide GTR":0.005502164104360319,
+       "original name":"gb_MW134116_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3258_2020_Segment_null_Host_Human"
+      },
+     "gb_MW134227_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3762_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW134227_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_3762_2020_Segment_null_Host_Human"
+      },
+     "gb_MW154346_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7465_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00558926836238096,
+       "Nucleotide GTR":0.005469891469620213,
+       "original name":"gb_MW154346_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC7465_2020_Segment_null_Host_Human"
+      },
+     "gb_MW154411_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC6964_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005626707674949456,
+       "Nucleotide GTR":0.005503925758102057,
+       "original name":"gb_MW154411_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC6964_2020_Segment_null_Host_Human"
+      },
+     "gb_MW155278_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC12385_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005599591446132323,
+       "Nucleotide GTR":0.00546921831544746,
+       "original name":"gb_MW155278_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC12385_2020_Segment_null_Host_Human"
+      },
+     "gb_MW155387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13741_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW155387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13741_2020_Segment_null_Host_Human"
+      },
+     "gb_MW155642_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13394_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005595351669285591,
+       "Nucleotide GTR":0.005481939800174911,
+       "original name":"gb_MW155642_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13394_2020_Segment_null_Host_Human"
+      },
+     "gb_MW155738_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11358_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005587580984696219,
+       "Nucleotide GTR":0.005469886922523423,
+       "original name":"gb_MW155738_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11358_2020_Segment_null_Host_Human"
+      },
+     "gb_MW155761_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10624_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW155761_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10624_2020_Segment_null_Host_Human"
+      },
+     "gb_MW156645_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11076_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631461427254542,
+       "Nucleotide GTR":0.005498065837320296,
+       "original name":"gb_MW156645_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11076_2020_Segment_null_Host_Human"
+      },
+     "gb_MW156732_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10631_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW156732_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10631_2020_Segment_null_Host_Human"
+      },
+     "gb_MW156840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11409_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW156840_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11409_2020_Segment_null_Host_Human"
+      },
+     "gb_MW156971_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10203_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW156971_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10203_2020_Segment_null_Host_Human"
+      },
+     "gb_MW157056_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11469_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005608363065658171,
+       "Nucleotide GTR":0.005475509356237068,
+       "original name":"gb_MW157056_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11469_2020_Segment_null_Host_Human"
+      },
+     "gb_MW181508_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201017695_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW181508_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201017695_2020_Segment_null_Host_Human"
+      },
+     "gb_MW181734_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5054_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005577337698600989,
+       "Nucleotide GTR":0.005479314715257354,
+       "original name":"gb_MW181734_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5054_2020_Segment_null_Host_Human"
+      },
+     "gb_MW181739_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5119_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW181739_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_Homo_sapiens_HKG_Case5119_2020_Segment_null_Host_Human"
+      },
+     "gb_MW190571_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_QDX_1809_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005596899747488087,
+       "Nucleotide GTR":0.005469223246210523,
+       "original name":"gb_MW190571_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_QDX_1809_2020_Segment_null_Host_Human"
+      },
+     "gb_MW193966_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_nimh_12171_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005622760517131436,
+       "Nucleotide GTR":0.005502683793209609,
+       "original name":"gb_MW193966_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_nimh_12171_2020_Segment_null_Host_Human"
+      },
+     "gb_MW206535_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1865_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.0003800049521821387,
+       "Nucleotide GTR":3.446325207460451e-05,
+       "original name":"gb_MW206535_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_1865_2020_Segment_null_Host_Human"
+      },
+     "gb_MW208032_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_VA_DCLS_1590_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005553335252079292,
+       "Nucleotide GTR":0.005484718157318245,
+       "original name":"gb_MW208032_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_VA_DCLS_1590_2020_Segment_null_Host_Human"
+      },
+     "gb_MW243997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0302_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005606726634993475,
+       "Nucleotide GTR":0.005472272589954402,
+       "original name":"gb_MW243997_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0302_2020_Segment_null_Host_Human"
+      },
+     "gb_MW244002_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0307_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594770869231513,
+       "Nucleotide GTR":0.005469725444783823,
+       "original name":"gb_MW244002_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0307_2020_Segment_null_Host_Human"
+      },
+     "gb_MW265628_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201129040_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW265628_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201129040_2020_Segment_null_Host_Human"
+      },
+     "gb_MW277035_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC16243_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005590816565229208,
+       "Nucleotide GTR":0.005473534032983342,
+       "original name":"gb_MW277035_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC16243_2020_Segment_null_Host_Human"
+      },
+     "gb_MW295643_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_202058412_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005595805219713066,
+       "Nucleotide GTR":0.005476623359288796,
+       "original name":"gb_MW295643_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_202058412_2020_Segment_null_Host_Human"
+      },
+     "gb_MW306356_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_12795_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW306356_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_12795_2020_Segment_null_Host_Human"
+      },
+     "gb_MW321239_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17424_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00559716714575011,
+       "Nucleotide GTR":0.005469940951746653,
+       "original name":"gb_MW321239_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17424_2020_Segment_null_Host_Human"
+      },
+     "gb_MW321253_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17363_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00563520070791567,
+       "Nucleotide GTR":0.005502119229349008,
+       "original name":"gb_MW321253_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC17363_2020_Segment_null_Host_Human"
+      },
+     "gb_MW332559_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BHR_341036734_S5_L001_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW332559_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BHR_341036734_S5_L001_2020_Segment_null_Host_Human"
+      },
+     "gb_MW341989_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2124_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005647021716533173,
+       "Nucleotide GTR":0.005511608249827844,
+       "original name":"gb_MW341989_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2124_2020_Segment_null_Host_Human"
+      },
+     "gb_MW375980_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201216229_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.006583164931338059,
+       "Nucleotide GTR":0.0064499981078652,
+       "original name":"gb_MW375980_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_UT_UPHL_201216229_2020_Segment_null_Host_Human"
+      },
+     "gb_MW406537_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_2_3693679_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005591410289624195,
+       "Nucleotide GTR":0.005472320917083399,
+       "original name":"gb_MW406537_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_2_3693679_2020_Segment_null_Host_Human"
+      },
+     "gb_MW420890_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NMDOH_2020316507_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005650746367647013,
+       "Nucleotide GTR":0.005522312703266265,
+       "original name":"gb_MW420890_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NMDOH_2020316507_2020_Segment_null_Host_Human"
+      },
+     "gb_MW433771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00076_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005617879278576598,
+       "Nucleotide GTR":0.005506158238914855,
+       "original name":"gb_MW433771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00076_2020_Segment_null_Host_Human"
+      },
+     "gb_MW435625_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_1968_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005620791031025037,
+       "Nucleotide GTR":0.005500747053952925,
+       "original name":"gb_MW435625_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_DSHS_1968_2020_Segment_null_Host_Human"
+      },
+     "gb_MW447630_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_PAK_JRCGR_KHI15_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005628620932055481,
+       "Nucleotide GTR":0.005504954920969972,
+       "original name":"gb_MW447630_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_PAK_JRCGR_KHI15_2020_Segment_null_Host_Human"
+      },
+     "gb_MW452545_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_ADAGE_T_15425_20_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005596377556106687,
+       "Nucleotide GTR":0.005475543502124678,
+       "original name":"gb_MW452545_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_ADAGE_T_15425_20_2020_Segment_null_Host_Human"
+      },
+     "gb_MW462661_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2263_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00559520708161924,
+       "Nucleotide GTR":0.005477834152100824,
+       "original name":"gb_MW462661_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2263_2020_Segment_null_Host_Human"
+      },
+     "gb_MW467476_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_A_71_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005627518337115913,
+       "Nucleotide GTR":0.005503877292547554,
+       "original name":"gb_MW467476_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_A_71_2020_Segment_null_Host_Human"
+      },
+     "gb_MW467498_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_P_32_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631898590697001,
+       "Nucleotide GTR":0.005503889967867453,
+       "original name":"gb_MW467498_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_EGY_CCHE57357_P_32_2020_Segment_null_Host_Human"
+      },
+     "gb_MW474247_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3080_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW474247_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3080_2020_Segment_null_Host_Human"
+      },
+     "gb_MW483544_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13396_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005627586887035462,
+       "Nucleotide GTR":0.005503944429328287,
+       "original name":"gb_MW483544_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13396_2020_Segment_null_Host_Human"
+      },
+     "gb_MW483548_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13407_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW483548_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_13407_2020_Segment_null_Host_Human"
+      },
+     "gb_MW486406_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2638_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005602460201045232,
+       "Nucleotide GTR":0.005472272548333728,
+       "original name":"gb_MW486406_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_UW_2638_2020_Segment_null_Host_Human"
+      },
+     "gb_MW490743_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2463_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005593545461979567,
+       "Nucleotide GTR":0.005471480342734438,
+       "original name":"gb_MW490743_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2463_2020_Segment_null_Host_Human"
+      },
+     "gb_MW490862_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2441_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005551269622625383,
+       "Nucleotide GTR":0.005446874253125438,
+       "original name":"gb_MW490862_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2441_2020_Segment_null_Host_Human"
+      },
+     "gb_MW490888_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2295_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005603475731176952,
+       "Nucleotide GTR":0.005476108506301237,
+       "original name":"gb_MW490888_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2295_2020_Segment_null_Host_Human"
+      },
+     "gb_MW490946_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2353_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW490946_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2353_2020_Segment_null_Host_Human"
+      },
+     "gb_MW491211_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2755_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005571456515223237,
+       "Nucleotide GTR":0.005473534846643134,
+       "original name":"gb_MW491211_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2755_2020_Segment_null_Host_Human"
+      },
+     "gb_MW493999_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3367_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005599041993646883,
+       "Nucleotide GTR":0.005479467003492122,
+       "original name":"gb_MW493999_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3367_2020_Segment_null_Host_Human"
+      },
+     "gb_MW494387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NH_CDC_STM_A100009_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005639680120219169,
+       "Nucleotide GTR":0.005526708482947178,
+       "original name":"gb_MW494387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NH_CDC_STM_A100009_2021_Segment_null_Host_Human"
+      },
+     "gb_MW505295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3142_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW505295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3142_2021_Segment_null_Host_Human"
+      },
+     "gb_MW509810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC11I035_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005586088008998721,
+       "Nucleotide GTR":0.005465473449096384,
+       "original name":"gb_MW509810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC11I035_2021_Segment_null_Host_Human"
+      },
+     "gb_MW518151_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A008_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005634240631758829,
+       "Nucleotide GTR":0.005500779085909651,
+       "original name":"gb_MW518151_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A008_2021_Segment_null_Host_Human"
+      },
+     "gb_MW519641_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_CDC_STM_A100453_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005592097236703835,
+       "Nucleotide GTR":0.005477110327819453,
+       "original name":"gb_MW519641_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_CDC_STM_A100453_2021_Segment_null_Host_Human"
+      },
+     "gb_MW519702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A100466_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005596421386762807,
+       "Nucleotide GTR":0.005469212541650541,
+       "original name":"gb_MW519702_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_STM_A100466_2021_Segment_null_Host_Human"
+      },
+     "gb_MW519849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_STM_A100104_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005588954140401627,
+       "Nucleotide GTR":0.005469916208737902,
+       "original name":"gb_MW519849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_STM_A100104_2021_Segment_null_Host_Human"
+      },
+     "gb_MW521749_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NV_QDX_3543_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005656794625639945,
+       "Nucleotide GTR":0.005524129764360818,
+       "original name":"gb_MW521749_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NV_QDX_3543_2020_Segment_null_Host_Human"
+      },
+     "gb_MW521810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3530_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005715221427981628,
+       "Nucleotide GTR":0.005549129254647589,
+       "original name":"gb_MW521810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3530_2020_Segment_null_Host_Human"
+      },
+     "gb_MW523039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_GPHL_0001_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005587898066365767,
+       "Nucleotide GTR":0.005470868608525645,
+       "original name":"gb_MW523039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_GA_GPHL_0001_2020_Segment_null_Host_Human"
+      },
+     "gb_MW524907_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_CDC_STM_0000013_C05_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005599551475806311,
+       "Nucleotide GTR":0.005472272589954402,
+       "original name":"gb_MW524907_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_CDC_STM_0000013_C05_2021_Segment_null_Host_Human"
+      },
+     "gb_MW528771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3759_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005577536395200471,
+       "Nucleotide GTR":0.005469212541650541,
+       "original name":"gb_MW528771_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3759_2021_Segment_null_Host_Human"
+      },
+     "gb_MW528794_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3784_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005653200025048807,
+       "Nucleotide GTR":0.005504548288821316,
+       "original name":"gb_MW528794_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3784_2021_Segment_null_Host_Human"
+      },
+     "gb_MW532096_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_GRBL_S4_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005599798877094273,
+       "Nucleotide GTR":0.005469421194916627,
+       "original name":"gb_MW532096_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_GRBL_S4_2020_Segment_null_Host_Human"
+      },
+     "gb_MW539842_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_00583_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005639168077612223,
+       "Nucleotide GTR":0.005503940468287404,
+       "original name":"gb_MW539842_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_00583_2020_Segment_null_Host_Human"
+      },
+     "gb_MW543030_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9A_6594_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005624245851634038,
+       "Nucleotide GTR":0.0055006759478777,
+       "original name":"gb_MW543030_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9A_6594_2020_Segment_null_Host_Human"
+      },
+     "gb_MW543039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9K_5198_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW543039_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9K_5198_2020_Segment_null_Host_Human"
+      },
+     "gb_MW545207_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3609_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005624669920591335,
+       "Nucleotide GTR":0.005504879338741244,
+       "original name":"gb_MW545207_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3609_2021_Segment_null_Host_Human"
+      },
+     "gb_MW545248_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3654_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005607827458873945,
+       "Nucleotide GTR":0.005496815955554284,
+       "original name":"gb_MW545248_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3654_2021_Segment_null_Host_Human"
+      },
+     "gb_MW545306_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3723_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005696038252603217,
+       "Nucleotide GTR":0.005574403599848595,
+       "original name":"gb_MW545306_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3723_2021_Segment_null_Host_Human"
+      },
+     "gb_MW547503_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC09I039_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":6.727838701995539e-05,
+       "Nucleotide GTR":1.14123408151218e-09,
+       "original name":"gb_MW547503_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC09I039_2020_Segment_null_Host_Human"
+      },
+     "gb_MW549223_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3727_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005610072814509211,
+       "Nucleotide GTR":0.005484688677972459,
+       "original name":"gb_MW549223_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3727_2020_Segment_null_Host_Human"
+      },
+     "gb_MW549830_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2465_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW549830_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2465_2020_Segment_null_Host_Human"
+      },
+     "gb_MW549937_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3900_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW549937_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3900_2021_Segment_null_Host_Human"
+      },
+     "gb_MW550020_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_ME_QDX_3871_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594324521607599,
+       "Nucleotide GTR":0.005473534074566229,
+       "original name":"gb_MW550020_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_ME_QDX_3871_2021_Segment_null_Host_Human"
+      },
+     "gb_MW550118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4040_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005569435803716104,
+       "Nucleotide GTR":0.005469423349423537,
+       "original name":"gb_MW550118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4040_2021_Segment_null_Host_Human"
+      },
+     "gb_MW550458_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WY_CDC_2_3767594_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594393610046846,
+       "Nucleotide GTR":0.005471472344810627,
+       "original name":"gb_MW550458_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WY_CDC_2_3767594_2020_Segment_null_Host_Human"
+      },
+     "gb_MW550504_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_CDC_2_3768672_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005606730226665676,
+       "Nucleotide GTR":0.005481420688897495,
+       "original name":"gb_MW550504_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_CDC_2_3768672_2020_Segment_null_Host_Human"
+      },
+     "gb_MW550636_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_2_3768676_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005627517606547703,
+       "Nucleotide GTR":0.005503876576921026,
+       "original name":"gb_MW550636_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_2_3768676_2020_Segment_null_Host_Human"
+      },
+     "gb_MW550674_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SC_CDC_2_3767563_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005634840007410624,
+       "Nucleotide GTR":0.005591009433219722,
+       "original name":"gb_MW550674_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SC_CDC_2_3767563_2021_Segment_null_Host_Human"
+      },
+     "gb_MW553298_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ARG_Cordoba_1006_155_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005619812298477012,
+       "Nucleotide GTR":0.005501927752053467,
+       "original name":"gb_MW553298_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ARG_Cordoba_1006_155_2020_Segment_null_Host_Human"
+      },
+     "gb_MW555931_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3980_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005635201285519044,
+       "Nucleotide GTR":0.005502119794132998,
+       "original name":"gb_MW555931_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S3980_2021_Segment_null_Host_Human"
+      },
+     "gb_MW556173_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_CDC_9MPQ_8899_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005600153944543833,
+       "Nucleotide GTR":0.005474989038608769,
+       "original name":"gb_MW556173_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IL_CDC_9MPQ_8899_2021_Segment_null_Host_Human"
+      },
+     "gb_MW560924_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00280_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.02284509533431139,
+       "Nucleotide GTR":0.02236069034936522,
+       "original name":"gb_MW560924_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_LACPHL_AF00280_2021_Segment_null_Host_Human"
+      },
+     "gb_MW564865_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14906_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594417446316588,
+       "Nucleotide GTR":0.005477059988349209,
+       "original name":"gb_MW564865_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14906_2020_Segment_null_Host_Human"
+      },
+     "gb_MW564882_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14886_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW564882_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14886_2020_Segment_null_Host_Human"
+      },
+     "gb_MW565403_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14413_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005628420377808867,
+       "Nucleotide GTR":0.00550395192954325,
+       "original name":"gb_MW565403_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14413_2020_Segment_null_Host_Human"
+      },
+     "gb_MW565438_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14344_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW565438_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14344_2020_Segment_null_Host_Human"
+      },
+     "gb_MW565832_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0724_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005637930624046485,
+       "Nucleotide GTR":0.005504055374831891,
+       "original name":"gb_MW565832_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0724_2021_Segment_null_Host_Human"
+      },
+     "gb_MW566477_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4490_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW566477_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4490_2020_Segment_null_Host_Human"
+      },
+     "gb_MW566557_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_4471_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005644974643171127,
+       "Nucleotide GTR":0.005507465784741251,
+       "original name":"gb_MW566557_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_4471_2020_Segment_null_Host_Human"
+      },
+     "gb_MW566849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2886_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005597894897064459,
+       "Nucleotide GTR":0.00547573581121221,
+       "original name":"gb_MW566849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2886_2020_Segment_null_Host_Human"
+      },
+     "gb_MW566943_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2980_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594439109235765,
+       "Nucleotide GTR":0.005477082299501769,
+       "original name":"gb_MW566943_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2980_2020_Segment_null_Host_Human"
+      },
+     "gb_MW571108_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS49_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00561060721171603,
+       "Nucleotide GTR":0.005482620664733259,
+       "original name":"gb_MW571108_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS49_2021_Segment_null_Host_Human"
+      },
+     "gb_MW571118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS145_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00564497413082662,
+       "Nucleotide GTR":0.005507465284314313,
+       "original name":"gb_MW571118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS145_2021_Segment_null_Host_Human"
+      },
+     "gb_MW571185_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS69_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005585212765833936,
+       "Nucleotide GTR":0.005466254167480196,
+       "original name":"gb_MW571185_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS69_2021_Segment_null_Host_Human"
+      },
+     "gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005592776885362145,
+       "Nucleotide GTR":0.005469891531533624,
+       "original name":"gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human"
+      },
+     "gb_MW578246_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0808_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW578246_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0808_2021_Segment_null_Host_Human"
+      },
+     "gb_MW583187_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_OK_CDC_STM_000003021_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005607987284385329,
+       "Nucleotide GTR":0.00548477129419081,
+       "original name":"gb_MW583187_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_OK_CDC_STM_000003021_2021_Segment_null_Host_Human"
+      },
+     "gb_MW583265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000001669_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005627843838488415,
+       "Nucleotide GTR":0.005502065975482428,
+       "original name":"gb_MW583265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000001669_2021_Segment_null_Host_Human"
+      },
+     "gb_MW585898_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_CDC_STM_000003612_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005601622409671225,
+       "Nucleotide GTR":0.005469327603117374,
+       "original name":"gb_MW585898_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_CDC_STM_000003612_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586184_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005891_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005602458594050764,
+       "Nucleotide GTR":0.005472270976472237,
+       "original name":"gb_MW586184_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005891_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586256_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005477_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005624783848606779,
+       "Nucleotide GTR":0.005540564899378007,
+       "original name":"gb_MW586256_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005477_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586274_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_CDC_STM_000005611_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005600641474542659,
+       "Nucleotide GTR":0.005470495330964893,
+       "original name":"gb_MW586274_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_CDC_STM_000005611_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586385_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000005076_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00559959639929567,
+       "Nucleotide GTR":0.005469223246210523,
+       "original name":"gb_MW586385_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000005076_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586419_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IA_CDC_STM_000005050_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005594960747753952,
+       "Nucleotide GTR":0.005471225791767793,
+       "original name":"gb_MW586419_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IA_CDC_STM_000005050_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586670_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000003618_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005631563484578439,
+       "Nucleotide GTR":0.005502098783965514,
+       "original name":"gb_MW586670_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000003618_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005626677136962362,
+       "Nucleotide GTR":0.00550519465215427,
+       "original name":"gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586846_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NY_QDX_4256_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005644491583174839,
+       "Nucleotide GTR":0.005500857587622745,
+       "original name":"gb_MW586846_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NY_QDX_4256_2021_Segment_null_Host_Human"
+      },
+     "gb_MW586849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_QDX_4292_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005620567293737872,
+       "Nucleotide GTR":0.005502668168648675,
+       "original name":"gb_MW586849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_QDX_4292_2021_Segment_null_Host_Human"
+      },
+     "gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00562424608287987,
+       "Nucleotide GTR":0.005540034388759709,
+       "original name":"gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human"
+      },
+     "gb_MW592782_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2311_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.1007052990360331,
+       "Nucleotide GTR":0.09915769560357757,
+       "original name":"gb_MW592782_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2311_2020_Segment_null_Host_Human"
+      },
+     "gb_MW593179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_1171_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005595436621876556,
+       "Nucleotide GTR":0.005472493519678674,
+       "original name":"gb_MW593179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_1171_2020_Segment_null_Host_Human"
+      },
+     "gb_MW593378_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_8518_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005697283165818841,
+       "Nucleotide GTR":0.005541823687839101,
+       "original name":"gb_MW593378_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_8518_2020_Segment_null_Host_Human"
+      },
+     "gb_MW593611_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_7938_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00571537194207626,
+       "Nucleotide GTR":0.005549275574329782,
+       "original name":"gb_MW593611_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_7938_2020_Segment_null_Host_Human"
+      },
+     "gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.01699151951028365,
+       "Nucleotide GTR":0.01664980103071093,
+       "original name":"gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human"
+      },
+     "gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0,
+       "Nucleotide GTR":0,
+       "original name":"gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human"
+      },
+     "gb_MW598427_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_nmimr_SARS_CoV_2_NTRA_15010_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.005601039300854873,
+       "Nucleotide GTR":0.005472270976472237,
+       "original name":"gb_MW598427_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_nmimr_SARS_CoV_2_NTRA_15010_2020_Segment_null_Host_Human"
+      },
+     "gb_MW599514_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_Broad_CRSP_00376_2021_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00559703102947049,
+       "Nucleotide GTR":0.005474054043185261,
+       "original name":"gb_MW599514_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_Broad_CRSP_00376_2021_Segment_null_Host_Human"
+      },
+     "gb_MW599662_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_Broad_RIDOH_00108_2020_Segment_null_Host_Human":{
+       "Global MG94xREV":0.00556465001233492,
+       "Nucleotide GTR":0.005445793699725887,
+       "original name":"gb_MW599662_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_Broad_RIDOH_00108_2020_Segment_null_Host_Human"
+      }
+    },
+   "attributes":{
+     "EBF site 1 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 10 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 11 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 12 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 13 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 14 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 15 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 16 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 17 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 18 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 19 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 2 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 20 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 21 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 22 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 24 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 25 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 26 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 27 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 28 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 29 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 3 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 30 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 31 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 32 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 33 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 34 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 35 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 36 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 37 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 38 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 39 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 4 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 40 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 41 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 42 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 43 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 44 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 45 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 46 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 47 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 48 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 49 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 5 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 50 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 51 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 52 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 53 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 54 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 55 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 56 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 57 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 58 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 59 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 6 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 60 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 61 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 7 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 8 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "EBF site 9 (partition 1)":{
+       "attribute type":"branch label",
+       "display order":63
+      },
+     "Global MG94xREV":{
+       "attribute type":"branch length",
+       "display order":1
+      },
+     "Nucleotide GTR":{
+       "attribute type":"branch length",
+       "display order":0
+      },
+     "original name":{
+       "attribute type":"node label",
+       "display order":-1
+      }
+    }
+  },
+ "data partitions":{
+   "0":{
+     "coverage":      [
+[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60] 
+      ],
+     "name":"meme.filter.default"
+    }
+  },
+ "fits":{
+   "Global MG94xREV":{
+     "AIC-c":3543.90202757597,
+     "Equilibrium frequencies":      [
+[0.05234569963398239],
+      [0.01820144287559587],
+      [0.03171602008431205],
+      [0.06431149409766418],
+      [0.01800320654271072],
+      [0.006260004885902283],
+      [0.01090806053378164],
+      [0.02211859081846959],
+      [0.004535586108948101],
+      [0.001577096343092366],
+      [0.002748090886765758],
+      [0.005572383621093118],
+      [0.05376506840134722],
+      [0.01869498025725739],
+      [0.03257600913112123],
+      [0.06605531883862786],
+      [0.02101229581979642],
+      [0.007306313693835135],
+      [0.01273125396924738],
+      [0.02581553304363397],
+      [0.007226738857737038],
+      [0.002512853499250144],
+      [0.004378648033338527],
+      [0.008878711654338001],
+      [0.001820647688420749],
+      [0.0006330685257641059],
+      [0.001103122110434494],
+      [0.002236832708064217],
+      [0.02158205029104791],
+      [0.00750442650031422],
+      [0.01307646559846798],
+      [0.02651552867978401],
+      [0.02716448109998729],
+      [0.009445527606734685],
+      [0.01645883490279689],
+      [0.03337405705040597],
+      [0.009342654072602125],
+      [0.003248591299723995],
+      [0.005660671388086015],
+      [0.01147830760593387],
+      [0.002353714708092291],
+      [0.0008184245144176013],
+      [0.00142610498047739],
+      [0.002891754444309577],
+      [0.02790105385237369],
+      [0.009701645816444848],
+      [0.01690512096586593],
+      [0.03427900424852968],
+      [0.01213232883613678],
+      [0.04286738143063773],
+      [0.01200019269757509],
+      [0.004172660283620678],
+      [0.007270861890722063],
+      [0.01474333760437351],
+      [0.001051227178605695],
+      [0.001831763697950316],
+      [0.003714320395052258],
+      [0.03583757036191434],
+      [0.01246130043735373],
+      [0.02171382003333725],
+      [0.04402974286179266] 
+      ],
+     "Log Likelihood":-1537.966628437365,
+     "Rate Distributions":{
+       "non-synonymous/synonymous rate ratio for *background*":        [
+[0.7611967859695254, 1] 
+        ],
+       "non-synonymous/synonymous rate ratio for *test*":        [
+[1.176519935855233, 1] 
+        ]
+      },
+     "display order":1,
+     "estimated parameters":229
+    },
+   "Nucleotide GTR":{
+     "AIC-c":3816.670733777944,
+     "Equilibrium frequencies":      [
+[0.3597004301674249],
+      [0.142728932627735],
+      [0.1424194596601987],
+      [0.3551511775446415] 
+      ],
+     "Log Likelihood":-1545.300525641431,
+     "Rate Distributions":{
+       "Substitution rate from nucleotide A to nucleotide C":0.4395430104915295,
+       "Substitution rate from nucleotide A to nucleotide G":1,
+       "Substitution rate from nucleotide A to nucleotide T":0.1216209022619113,
+       "Substitution rate from nucleotide C to nucleotide G":0.1952279380624755,
+       "Substitution rate from nucleotide C to nucleotide T":1.466497674587222,
+       "Substitution rate from nucleotide G to nucleotide T":0.7918204256778225
+      },
+     "display order":0,
+     "estimated parameters":359
+    }
+  },
+ "input":{
+   "file name":"/home/aglucaci/SARS-CoV-2/clades/B-1-617/ORF6.combined.fas",
+   "number of sequences":177,
+   "number of sites":61,
+   "partition count":1,
+   "trees":{
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HCRC_8518_2020_Segment_null_Host_Human,gb_MW452545_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_TUN_TUN_ADAGE_T_15425_20_2020_Segment_null_Host_Human,(gb_MW155387_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13741_2020_Segment_null_Host_Human,gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human)Node57,gb_MW550636_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_CDC_2_3768676_2020_Segment_null_Host_Human,gb_MW565403_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14413_2020_Segment_null_Host_Human,gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human,gb_MW406537_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IN_CDC_2_3693679_2020_Segment_null_Host_Human,gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human,(gb_MW156645_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC11076_2020_Segment_null_Host_Human,gb_MW156971_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC10203_2020_Segment_null_Host_Human,epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021,gb_MW420890_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NMDOH_2020316507_2020_Segment_null_Host_Human)Node62,epi_isl_1589926_hCoV_19_India_WB_1930300586246_2021,(gb_MW509810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_EGY_CUNCI_HGC11I035_2021_Segment_null_Host_Human,gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human)Node71,gb_MW064863_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WI_QDX_779_2020_Segment_null_Host_Human,gb_MW155278_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC12385_2020_Segment_null_Host_Human,epi_isl_1442952_hCoV_19_Singapore_321_2021,gb_MW193966_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_IND_nimh_12171_2020_Segment_null_Host_Human,gb_MW462661_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2263_2020_Segment_null_Host_Human,epi_isl_1516887_hCoV_19_Australia_QLD1826_2021,gb_MW521810_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_3530_2020_Segment_null_Host_Human,gb_MW490888_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2295_2020_Segment_null_Host_Human,gb_MW155642_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC13394_2020_Segment_null_Host_Human,gb_MT847221_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_283_2020_Segment_null_Host_Human,gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human,gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human,gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human,gb_MW543030_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_AZ_CDC_IR9A_6594_2020_Segment_null_Host_Human,gb_MW545207_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_3609_2021_Segment_null_Host_Human,gb_MT873189_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_DPH_00301_2020_Segment_null_Host_Human,(gb_MW564882_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14886_2020_Segment_null_Host_Human,gb_MT811295_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_0657_IPL_2020_Segment_null_Host_Human)Node100,gb_MT811511_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_SEARCH_1079_SAN_2020_Segment_null_Host_Human)"
+    }
+  },
+ "tested":{
+   "0":{
+     "Node100":"background",
+     "Node112":"background",
+     "Node115":"background",
+     "Node119":"background",
+     "Node172":"background",
+     "Node177":"background",
+     "Node184":"background",
+     "Node194":"background",
+     "Node198":"background",
+     "Node201":"background",
+     "Node206":"background",
+     "Node22":"background",
+     "Node226":"background",
+     "Node23":"background",
+     "Node230":"background",
+     "Node231":"background",
+     "Node241":"background",
+     "Node244":"background",
+     "Node245":"background",
+     "Node252":"background",
+     "Node258":"background",
+     "Node260":"background",
+     "Node264":"background",
+     "Node283":"background",
+     "Node290":"background",
+     "Node292":"background",
+     "Node319":"background",
+     "Node324":"background",
+     "Node33":"background",
+     "Node332":"background",
+     "Node338":"background",
+     "Node342":"background",
+     "Node36":"background",
+     "Node57":"background",
+     "Node62":"background",
+     "Node71":"background",
+     "REFERENCE":"background",
+     "epi_isl_1181694_hCoV_19_USA_DE_DHSS_B1064373_2021":"test",
+     "epi_isl_1284652_hCoV_19_Germany_SN_RKI_I_038291_2021":"test",
+     "epi_isl_1442952_hCoV_19_Singapore_321_2021":"test",
+     "epi_isl_1470937_hCoV_19_USA_NY_PRL_2021_03_29_01C17_2021":"test",
+     "epi_isl_1512225_hCoV_19_USA_GA_CDC_STM_000041012_2021":"test",
+     "epi_isl_1516887_hCoV_19_Australia_QLD1826_2021":"test",
+     "epi_isl_1533793_hCoV_19_India_MH_NCCS_CHN21027888_2021":"test",
+     "epi_isl_1533799_hCoV_19_India_MH_NCCS_9947_2021":"test",
+     "epi_isl_1543980_hCoV_19_Singapore_490_2021":"test",
+     "epi_isl_1589923_hCoV_19_India_WB_1930300571091_2021":"test",
+     "epi_isl_1589926_hCoV_19_India_WB_1930300586246_2021":"test",
+     "epi_isl_1631286_hCoV_19_England_CAMC_14E7527_2021":"test",
+     "gb_LC571023_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_DP0724_Segment_null_Host_Human":"background",
+     "gb_MT326182_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CT_UW_1365_2020_Segment_null_Host_Human":"background",
+     "gb_MT358638_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_DEU_FFM1_2020_Segment_null_Host_Human":"background",
+     "gb_MT359866_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_ESP_VH198152683_2020_Segment_null_Host_Human":"background",
+     "gb_MT447156_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_THA_SI200383_NT_2020_Segment_null_Host_Human":"background",
+     "gb_MT449654_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1063_2020_Segment_null_Host_Human":"background",
+     "gb_MT451104_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC203_2020_Segment_null_Host_Human":"background",
+     "gb_MT520188_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00184_2020_Segment_null_Host_Human":"background",
+     "gb_MT520493_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MGH_00316_2020_Segment_null_Host_Human":"background",
+     "gb_MT601276_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_52_2020_Segment_null_Host_Human":"background",
+     "gb_MT601281_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_BGD_BCSIR_NILMRC_67_2020_Segment_null_Host_Human":"background",
+     "gb_MT612186_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_AUS_VIC1576_2020_Segment_null_Host_Human":"background",
+     "gb_MT627613_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_WA_S260_2020_Segment_null_Host_Human":"background",
+     "gb_MT631787_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_1651_2020_Segment_null_Host_Human":"background",
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+     "gb_MW565438_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CZB_14344_2020_Segment_null_Host_Human":"background",
+     "gb_MW565832_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0724_2021_Segment_null_Host_Human":"background",
+     "gb_MW566477_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4490_2020_Segment_null_Host_Human":"background",
+     "gb_MW566557_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_QDX_4471_2020_Segment_null_Host_Human":"background",
+     "gb_MW566849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2886_2020_Segment_null_Host_Human":"background",
+     "gb_MW566943_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_BPHL_2980_2020_Segment_null_Host_Human":"background",
+     "gb_MW571108_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS49_2021_Segment_null_Host_Human":"background",
+     "gb_MW571118_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS145_2021_Segment_null_Host_Human":"background",
+     "gb_MW571185_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_WACCBIP_nCoV_GS69_2021_Segment_null_Host_Human":"background",
+     "gb_MW578233_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0795_2021_Segment_null_Host_Human":"background",
+     "gb_MW578246_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MD_MDH_0808_2021_Segment_null_Host_Human":"background",
+     "gb_MW583187_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_OK_CDC_STM_000003021_2021_Segment_null_Host_Human":"background",
+     "gb_MW583265_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_CDC_STM_000001669_2021_Segment_null_Host_Human":"background",
+     "gb_MW585898_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_CDC_STM_000003612_2021_Segment_null_Host_Human":"background",
+     "gb_MW586184_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005891_2021_Segment_null_Host_Human":"background",
+     "gb_MW586256_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000005477_2021_Segment_null_Host_Human":"background",
+     "gb_MW586274_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_TX_CDC_STM_000005611_2021_Segment_null_Host_Human":"background",
+     "gb_MW586385_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000005076_2021_Segment_null_Host_Human":"background",
+     "gb_MW586419_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_IA_CDC_STM_000005050_2021_Segment_null_Host_Human":"background",
+     "gb_MW586670_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FL_CDC_STM_000003618_2021_Segment_null_Host_Human":"background",
+     "gb_MW586700_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_CA_QDX_4173_2021_Segment_null_Host_Human":"background",
+     "gb_MW586846_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_NY_QDX_4256_2021_Segment_null_Host_Human":"background",
+     "gb_MW586849_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_PA_QDX_4292_2021_Segment_null_Host_Human":"background",
+     "gb_MW592637_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_MASPHL_01774_2021_Segment_null_Host_Human":"background",
+     "gb_MW592782_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MN_MDH_2311_2020_Segment_null_Host_Human":"background",
+     "gb_MW593179_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_1171_2020_Segment_null_Host_Human":"background",
+     "gb_MW593378_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_8518_2020_Segment_null_Host_Human":"background",
+     "gb_MW593611_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_7938_2020_Segment_null_Host_Human":"background",
+     "gb_MW593708_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_FHCRC_4325_2020_Segment_null_Host_Human":"background",
+     "gb_MW596234_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_LA_CDC_STM_000008248_2021_Segment_null_Host_Human":"background",
+     "gb_MW598427_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_GHA_nmimr_SARS_CoV_2_NTRA_15010_2020_Segment_null_Host_Human":"background",
+     "gb_MW599514_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_MA_Broad_CRSP_00376_2021_Segment_null_Host_Human":"background",
+     "gb_MW599662_Organism_Severe_acute_respiratory_syndrome_coronavirus_2_Strain_Name_SARS_CoV_2_human_USA_RI_Broad_RIDOH_00108_2020_Segment_null_Host_Human":"background"
+    }
+  },
+ "timers":{
+   "MEME analysis":{
+     "order":2,
+     "timer":24
+    },
+   "Model fitting":{
+     "order":1,
+     "timer":12
+    },
+   "Total time":{
+     "order":0,
+     "timer":36
+    }
+  }
+}
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summary/ORF6.SLAC.json	Wed Jun 09 07:04:45 2021 +0000
@@ -0,0 +1,4781 @@
+{
+ "MLE":{
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