Mercurial > repos > iuc > isoformswitchanalyzer

view test-data/test06_consequences_summary.tabular @ 0:f3fefb6d8254 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 2c61e4c6151000201dd9a8323722a380bc235380
author iuc
date Tue, 24 Jan 2023 18:37:14 +0000
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children b3f292d9f35d
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Comparison	featureCompared	switchConsequence	nrGenesWithConsequences	nrIsoWithConsequences
cancer vs health	Intron
retention	Intron retention gain	3	5
cancer vs health	Intron
retention	Intron retention loss	9	11
cancer vs health	Isoform seq
similarity	Length gain	11	17
cancer vs health	Isoform seq
similarity	Length loss	15	26
cancer vs health	NMD
status	NMD insensitive	1	3
cancer vs health	NMD
status	NMD sensitive	2	2
cancer vs health	Tss	Tss more downstream	19	30
cancer vs health	Tss	Tss more upstream	14	29
cancer vs health	Tts	Tts more downstream	6	13
cancer vs health	Tts	Tts more upstream	6	8
cancer vs health	ORF
genomic	Any consequence	0	0