Mercurial > repos > iuc > isoformswitchanalyzer

view test-data/test06_consequences_summary.tabular @ 5:b3f292d9f35d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
author iuc
date Fri, 02 Jun 2023 10:27:16 +0000
parents f3fefb6d8254
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Comparison	featureCompared	switchConsequence	nrGenesWithConsequences	nrIsoWithConsequences
health vs cancer	Intron
retention	Intron retention gain	9	11
health vs cancer	Intron
retention	Intron retention loss	3	5
health vs cancer	Isoform seq
similarity	Length gain	15	26
health vs cancer	Isoform seq
similarity	Length loss	11	17
health vs cancer	NMD
status	NMD insensitive	2	2
health vs cancer	NMD
status	NMD sensitive	1	3
health vs cancer	Tss	Tss more downstream	14	29
health vs cancer	Tss	Tss more upstream	19	30
health vs cancer	Tts	Tts more downstream	6	8
health vs cancer	Tts	Tts more upstream	6	13
health vs cancer	ORF
genomic	Any consequence	0	0