Mercurial > repos > iuc > mg_toolkit_original_metadata
comparison test-data/taxonomic_analysis_lsu_rrna/MGYS00002316_metadata.tsv @ 1:b613e5dd5e83 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/mg_toolkit commit df500c27a6ef0ea25e0361feada7df8dedee98f1
| author | iuc |
|---|---|
| date | Tue, 30 Jul 2024 15:41:16 +0000 |
| parents | |
| children |
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| 0:2eef3b6f1c84 | 1:b613e5dd5e83 |
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| 1 analysis_id name group_type description download_url pipeline_version experiment_type | |
| 2 MGYA00153745 OFEK01.Archaea_SRP.RF01857.fa non-coding RNAs Predicted Archaea SRP RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.Archaea_SRP.RF01857.fa 4.1 assembly | |
| 3 MGYA00153745 OFEK01.Bacteria_large_SRP.RF01854.fa non-coding RNAs Predicted Bacteria large SRP RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.Bacteria_large_SRP.RF01854.fa 4.1 assembly | |
| 4 MGYA00153745 OFEK01.Bacteria_small_SRP.RF00169.fa non-coding RNAs Predicted Bacteria small SRP RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.Bacteria_small_SRP.RF00169.fa 4.1 assembly | |
| 5 MGYA00153745 OFEK01.LSU_rRNA_archaea.RF02540.fa non-coding RNAs Predicted Archaeal LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.LSU_rRNA_archaea.RF02540.fa 4.1 assembly | |
| 6 MGYA00153745 OFEK01.beta_tmRNA.RF01850.fa non-coding RNAs Predicted beta tmRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.beta_tmRNA.RF01850.fa 4.1 assembly | |
| 7 MGYA00153745 OFEK01_FASTA.fasta.gz Sequence data Processed contigs https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA.fasta.gz 4.1 assembly | |
| 8 MGYA00153745 OFEK01_FASTA_CDS_annotated.faa.gz Sequence data Predicted CDS with annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_CDS_annotated.faa.gz 4.1 assembly | |
| 9 MGYA00153745 OFEK01_FASTA_CDS_unannotated.faa.gz Sequence data Predicted CDS without annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_CDS_unannotated.faa.gz 4.1 assembly | |
| 10 MGYA00153745 OFEK01_FASTA_GO.csv Functional analysis Complete GO annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_GO.csv 4.1 assembly | |
| 11 MGYA00153745 OFEK01_FASTA_GO_slim.csv Functional analysis GO slim annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_GO_slim.csv 4.1 assembly | |
| 12 MGYA00153745 OFEK01_FASTA_InterPro.tsv.gz Functional analysis InterPro matches https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_InterPro.tsv.gz 4.1 assembly | |
| 13 MGYA00153745 OFEK01_FASTA_LSU.fasta.gz Taxonomic analysis LSU rRNA Contigs encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_LSU.fasta.gz 4.1 assembly | |
| 14 MGYA00153745 OFEK01_FASTA_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_LSU_MAPSeq.mseq.gz 4.1 assembly | |
| 15 MGYA00153745 OFEK01_FASTA_LSU_OTU.tsv Taxonomic analysis LSU rRNA Contigs encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_LSU_OTU.tsv 4.1 assembly | |
| 16 MGYA00153745 OFEK01_FASTA_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_LSU_OTU_TABLE_HDF5.biom 4.1 assembly | |
| 17 MGYA00153745 OFEK01_FASTA_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_LSU_OTU_TABLE_JSON.biom 4.1 assembly | |
| 18 MGYA00153745 OFEK01_FASTA_ORF_unannotated.ffn.gz Sequence data Predicted ORF without annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_ORF_unannotated.ffn.gz 4.1 assembly | |
| 19 MGYA00153745 OFEK01_FASTA_SSU.fasta.gz Taxonomic analysis SSU rRNA Contigs encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_SSU.fasta.gz 4.1 assembly | |
| 20 MGYA00153745 OFEK01_FASTA_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_SSU_MAPSeq.mseq.gz 4.1 assembly | |
| 21 MGYA00153745 OFEK01_FASTA_SSU_OTU.tsv Taxonomic analysis SSU rRNA Contigs encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_SSU_OTU.tsv 4.1 assembly | |
| 22 MGYA00153745 OFEK01_FASTA_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_SSU_OTU_TABLE_HDF5.biom 4.1 assembly | |
| 23 MGYA00153745 OFEK01_FASTA_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_SSU_OTU_TABLE_JSON.biom 4.1 assembly | |
| 24 MGYA00153745 OFEK01_FASTA_interproscan.fasta.gz Sequence data Processed contigs with annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_interproscan.fasta.gz 4.1 assembly | |
| 25 MGYA00153745 OFEK01_FASTA_noFunction.fasta.gz Sequence data Processed contigs without annotation https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_noFunction.fasta.gz 4.1 assembly | |
| 26 MGYA00153745 OFEK01_FASTA_readsWithpCDS.fasta.gz Sequence data Processed contigs with pCDS https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01_FASTA_readsWithpCDS.fasta.gz 4.1 assembly | |
| 27 MGYA00153745 OFEK01.LSU_rRNA_bacteria.RF02541.fa non-coding RNAs Predicted Bacterial LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.LSU_rRNA_bacteria.RF02541.fa 4.1 assembly | |
| 28 MGYA00153745 OFEK01.RNaseP_arch.RF00373.fa non-coding RNAs Predicted Archaeal RNase P RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.RNaseP_arch.RF00373.fa 4.1 assembly | |
| 29 MGYA00153745 OFEK01.RNaseP_bact_a.RF00010.fa non-coding RNAs Predicted Bacterial RNase P class A RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.RNaseP_bact_a.RF00010.fa 4.1 assembly | |
| 30 MGYA00153745 OFEK01.RNaseP_bact_b.RF00011.fa non-coding RNAs Predicted Bacterial RNase P class B RNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.RNaseP_bact_b.RF00011.fa 4.1 assembly | |
| 31 MGYA00153745 OFEK01.SSU_rRNA_archaea.RF01959.fa non-coding RNAs Predicted Archaeal SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.SSU_rRNA_archaea.RF01959.fa 4.1 assembly | |
| 32 MGYA00153745 OFEK01.SSU_rRNA_bacteria.RF00177.fa non-coding RNAs Predicted Bacterial SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.SSU_rRNA_bacteria.RF00177.fa 4.1 assembly | |
| 33 MGYA00153745 OFEK01.SSU_rRNA_eukarya.RF01960.fa non-coding RNAs Predicted Eukaryotic SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.SSU_rRNA_eukarya.RF01960.fa 4.1 assembly | |
| 34 MGYA00153745 OFEK01.tRNA-Sec.RF01852.fa non-coding RNAs Predicted tRNA-Sec https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.tRNA-Sec.RF01852.fa 4.1 assembly | |
| 35 MGYA00153745 OFEK01.tRNA.RF00005.fa non-coding RNAs Predicted tRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.tRNA.RF00005.fa 4.1 assembly | |
| 36 MGYA00153745 OFEK01.tmRNA.RF00023.fa non-coding RNAs Predicted tmRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00153745/file/OFEK01.tmRNA.RF00023.fa 4.1 assembly |