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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/mg_toolkit commit df500c27a6ef0ea25e0361feada7df8dedee98f1
author | iuc |
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date | Tue, 30 Jul 2024 15:41:16 +0000 |
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analysis_id name group_type description download_url pipeline_version experiment_type MGYA00522964 SRR1143324_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ.fasta.gz 5.0 amplicon MGYA00522964 SRR1143324_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00522964 SRR1143324_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00522964 SRR1143324_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00522964 SRR1143324_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00522964 SRR1143324_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00522964/file/SRR1143324_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00523065 SRR1145433_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ.fasta.gz 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00523065 SRR1145433_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523065/file/SRR1145433_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00523066 SRR1143350_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ.fasta.gz 5.0 amplicon MGYA00523066 SRR1143350_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00523066 SRR1143350_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00523066 SRR1143350_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00523066 SRR1143350_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00523066 SRR1143350_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523066/file/SRR1143350_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00523553 SRR1145437_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ.fasta.gz 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00523553 SRR1145437_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523553/file/SRR1145437_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00523554 SRR1145434_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ.fasta.gz 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00523554 SRR1145434_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523554/file/SRR1145434_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00523555 SRR1145427_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ.fasta.gz 5.0 amplicon MGYA00523555 SRR1145427_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00523555 SRR1145427_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00523555 SRR1145427_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00523555 SRR1145427_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00523555 SRR1145427_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00523555/file/SRR1145427_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00524159 SRR1145429_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ.fasta.gz 5.0 amplicon MGYA00524159 SRR1145429_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00524159 SRR1145429_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00524159 SRR1145429_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00524159 SRR1145429_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00524159 SRR1145429_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524159/file/SRR1145429_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00524403 SRR1141249_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ.fasta.gz 5.0 amplicon MGYA00524403 SRR1141249_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00524403 SRR1141249_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00524403 SRR1141249_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00524403 SRR1141249_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00524403 SRR1141249_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524403/file/SRR1141249_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00524908 SRR1145436_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ.fasta.gz 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00524908 SRR1145436_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00524908/file/SRR1145436_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00525007 SRR1145439_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ.fasta.gz 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00525007 SRR1145439_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525007/file/SRR1145439_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00525008 SRR1145431_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ.fasta.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00525008 SRR1145431_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00525008/file/SRR1145431_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544131 SRR1145438_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ.fasta.gz 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544131 SRR1145438_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544131/file/SRR1145438_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544132 SRR1145435_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ.fasta.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544132 SRR1145435_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544132/file/SRR1145435_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544133 SRR1145432_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ.fasta.gz 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_5.8S.fasta.gz non-coding RNAs Reads encoding 5.8S https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_5.8S.fasta.gz 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_LSU.fasta.gz Taxonomic analysis LSU rRNA Reads encoding LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_LSU.fasta.gz 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_LSU_MAPSeq.mseq.gz Taxonomic analysis LSU rRNA MAPseq LSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_LSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_LSU_OTU.tsv Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_LSU_OTU.tsv 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_LSU_OTU_TABLE_HDF5.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_LSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544133 SRR1145432_FASTQ_LSU_OTU_TABLE_JSON.biom Taxonomic analysis LSU rRNA OTUs, counts and taxonomic assignments for LSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544133/file/SRR1145432_FASTQ_LSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544134 SRR1145430_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ.fasta.gz 5.0 amplicon MGYA00544134 SRR1145430_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00544134 SRR1145430_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544134 SRR1145430_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00544134 SRR1145430_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544134 SRR1145430_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544134/file/SRR1145430_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544135 SRR1145428_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ.fasta.gz 5.0 amplicon MGYA00544135 SRR1145428_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00544135 SRR1145428_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544135 SRR1145428_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00544135 SRR1145428_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544135 SRR1145428_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544135/file/SRR1145428_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544136 SRR1143339_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ.fasta.gz 5.0 amplicon MGYA00544136 SRR1143339_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00544136 SRR1143339_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544136 SRR1143339_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00544136 SRR1143339_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544136 SRR1143339_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544136/file/SRR1143339_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon MGYA00544137 SRR1141250_FASTQ.fasta.gz Sequence data Processed nucleotide reads https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ.fasta.gz 5.0 amplicon MGYA00544137 SRR1141250_FASTQ_SSU.fasta.gz Taxonomic analysis SSU rRNA Reads encoding SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ_SSU.fasta.gz 5.0 amplicon MGYA00544137 SRR1141250_FASTQ_SSU_MAPSeq.mseq.gz Taxonomic analysis SSU rRNA MAPseq SSU assignments https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ_SSU_MAPSeq.mseq.gz 5.0 amplicon MGYA00544137 SRR1141250_FASTQ_SSU_OTU.tsv Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ_SSU_OTU.tsv 5.0 amplicon MGYA00544137 SRR1141250_FASTQ_SSU_OTU_TABLE_HDF5.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ_SSU_OTU_TABLE_HDF5.biom 5.0 amplicon MGYA00544137 SRR1141250_FASTQ_SSU_OTU_TABLE_JSON.biom Taxonomic analysis SSU rRNA OTUs, counts and taxonomic assignments for SSU rRNA https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00544137/file/SRR1141250_FASTQ_SSU_OTU_TABLE_JSON.biom 5.0 amplicon