Mercurial > repos > iuc > ont_fast5_api_multi_to_single_fast5
view multi_to_single_fast5.xml @ 0:1a37f742e7d7 draft
"planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit a5d038871ff0e1b133039b59183dee795449b383"
author | iuc |
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date | Fri, 12 Jun 2020 15:07:40 -0400 |
parents | |
children | 68fc6a9c05df |
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<?xml version="1.0"?> <tool id="ont_fast5_api_multi_to_single_fast5" name="@TOOL_NAME@ Multi to single" version="@TOOL_VERSION@+galaxy0" profile="18.01"> <description>read file(s)</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <version_command><![CDATA[multi_to_single_fast5 -v]]></version_command> <command detect_errors="exit_code"><![CDATA[ ## initialize @INITIALIZE@ ## run multi_to_single_fast5 ## required @INPUTPATH@ @SAVEPATH@ ## optional @THREADS@ ## create tarball @TARBALL@ ]]></command> <inputs> <expand macro="input"/> </inputs> <outputs> <expand macro="output"/> </outputs> <tests> <!-- #1 default --> <test expect_num_outputs="1"> <param name="input_path" value="multi.fast5.tar"/> <output name="out_results"> <assert_contents> <has_size value="71680"/> </assert_contents> </output> </test> </tests> <help><![CDATA[ .. class:: infomark **What it does** @WID@ *multi_to_single_fast5* converts multi read FAST5 file(s) into single read FAST5 files. **Input** Multi read file(s) in FAST5 format that are stored in a flat TAR. **Output** Single read FAST5 files that are stored in a flat TAR. .. class:: infomark **References** @REFERENCES@ ]]></help> <expand macro="citations"/> </tool>