Mercurial > repos > iuc > package_pysam_0_7_7

changeset 1:0a5141bdf9d0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_pysam_0_7_7 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 10:46:47 -0400
parents b62538c8c664
children
files tool_dependencies.xml
diffstat 1 files changed, 9 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Nov 28 12:42:05 2013 -0500
+++ b/tool_dependencies.xml	Fri Jul 17 10:46:47 2015 -0400
@@ -1,15 +1,24 @@
 <?xml version="1.0"?>
 <tool_dependency>
+    <package name="ez_setup" version="0.9">
+        <repository changeset_revision="10fd2e2a9f2f" name="package_ez_setup_0_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
     <package name="pysam" version="0.7.7">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">https://pypi.python.org/packages/source/p/pysam/pysam-0.7.7.tar.gz</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="10fd2e2a9f2f" name="package_ez_setup_0_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="ez_setup" version="0.9" />
+                    </repository>
+                </action>
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
                 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="set_to" name="PYSAM_PATH">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="set_to" name="PYSAM_ROOT_PATH">$INSTALL_DIR</environment_variable>
                 </action>
             </actions>
         </install>