Mercurial > repos > iuc > quast
comparison test-data/test1_output.tsv @ 4:0834c823d4b9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 2c56b5f07500507dad503aab6ec0619ec37f8b87
| author | iuc |
|---|---|
| date | Mon, 12 Feb 2018 09:05:20 -0500 |
| parents | |
| children | 81df4950d65b |
comparison
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| 3:6fcbee531de6 | 4:0834c823d4b9 |
|---|---|
| 1 Assembly contigs2_fna contigs1_fna | |
| 2 # contigs (>= 0 bp) 1 3 | |
| 3 # contigs (>= 1000 bp) 1 3 | |
| 4 Total length (>= 0 bp) 6650 6710 | |
| 5 Total length (>= 1000 bp) 6650 6710 | |
| 6 # contigs 1 3 | |
| 7 Largest contig 6650 3980 | |
| 8 Total length 6650 6710 | |
| 9 Reference length 6650 6650 | |
| 10 GC (%) 52.00 51.28 | |
| 11 Reference GC (%) 52.00 52.00 | |
| 12 N50 6650 3980 | |
| 13 NG50 6650 3980 | |
| 14 N75 6650 1610 | |
| 15 NG75 6650 1610 | |
| 16 L50 1 1 | |
| 17 LG50 1 1 | |
| 18 L75 1 2 | |
| 19 LG75 1 2 | |
| 20 # misassemblies 0 0 | |
| 21 # misassembled contigs 0 0 | |
| 22 Misassembled contigs length 0 0 | |
| 23 # local misassemblies 0 0 | |
| 24 # unaligned mis. contigs 0 0 | |
| 25 # unaligned contigs 0 + 0 part 0 + 1 part | |
| 26 Unaligned length 0 1950 | |
| 27 Genome fraction (%) 100.000 71.579 | |
| 28 Duplication ratio 1.000 1.000 | |
| 29 # N's per 100 kbp 0.00 0.00 | |
| 30 # mismatches per 100 kbp 0.00 0.00 | |
| 31 # indels per 100 kbp 0.00 0.00 | |
| 32 # genes 6 + 0 part 3 + 3 part | |
| 33 Largest alignment 6650 2030 | |
| 34 Total aligned length 6650 4760 | |
| 35 NA50 6650 1610 | |
| 36 NGA50 6650 1610 | |
| 37 NA75 6650 - | |
| 38 NGA75 6650 - | |
| 39 LA50 1 2 | |
| 40 LGA50 1 2 | |
| 41 LA75 1 - | |
| 42 LGA75 1 - |