comparison test-data/test-cache/tophat-test/genomeParameters.txt @ 0:e3c94e2933c9 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 686574b0392e554b75035a9b79bc919dfda9ab97"
author iuc
date Thu, 15 Aug 2019 01:53:49 -0400
parents
children e403d27e8f24
comparison
equal deleted inserted replaced
-1:000000000000 0:e3c94e2933c9
1 ### STAR --runMode genomeGenerate --genomeDir test-cache/tophat_test/ --genomeFastaFiles tophat_test.fa --genomeSAindexNbases 5
2 ### GstrandBit 32
3 versionGenome 2.7.1a
4 genomeFastaFiles tophat_test.fa
5 genomeSAindexNbases 5
6 genomeChrBinNbits 18
7 genomeSAsparseD 1
8 sjdbOverhang 0
9 sjdbFileChrStartEnd -
10 sjdbGTFfile -
11 sjdbGTFchrPrefix -
12 sjdbGTFfeatureExon exon
13 sjdbGTFtagExonParentTranscript transcript_id
14 sjdbGTFtagExonParentGene gene_id
15 sjdbInsertSave Basic
16 genomeFileSizes 262144 5366