Mercurial > repos > iuc > rna_starsolo
comparison test-data/test-cache/tophat-test/genomeParameters.txt @ 0:e3c94e2933c9 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 686574b0392e554b75035a9b79bc919dfda9ab97"
| author | iuc |
|---|---|
| date | Thu, 15 Aug 2019 01:53:49 -0400 |
| parents | |
| children | e403d27e8f24 |
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| -1:000000000000 | 0:e3c94e2933c9 |
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| 1 ### STAR --runMode genomeGenerate --genomeDir test-cache/tophat_test/ --genomeFastaFiles tophat_test.fa --genomeSAindexNbases 5 | |
| 2 ### GstrandBit 32 | |
| 3 versionGenome 2.7.1a | |
| 4 genomeFastaFiles tophat_test.fa | |
| 5 genomeSAindexNbases 5 | |
| 6 genomeChrBinNbits 18 | |
| 7 genomeSAsparseD 1 | |
| 8 sjdbOverhang 0 | |
| 9 sjdbFileChrStartEnd - | |
| 10 sjdbGTFfile - | |
| 11 sjdbGTFchrPrefix - | |
| 12 sjdbGTFfeatureExon exon | |
| 13 sjdbGTFtagExonParentTranscript transcript_id | |
| 14 sjdbGTFtagExonParentGene gene_id | |
| 15 sjdbInsertSave Basic | |
| 16 genomeFileSizes 262144 5366 |