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annotate tool_dependencies.xml @ 22:062399f3787f draft

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new version of gbsx: v1.2 with barcodeGenerator, demultiplex and digest
author koen
date Tue, 26 Jan 2016 07:38:36 -0500
parents efd8c94168d4
children 3b325560887b
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058ec87cebd6 Uploaded tool_dependencies.xml
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1 <?xml version="1.0"?>
058ec87cebd6 Uploaded tool_dependencies.xml
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2 <tool_dependency>
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3 <package name="GBSX" version="1.2">
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058ec87cebd6 Uploaded tool_dependencies.xml
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">https://github.com/GenomicsCoreLeuven/GBSX/releases/download/v1.2/GBSX_v1.2.jar</action>
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7 <action type="move_file" rename_to="GBSX.jar"><source>GBSX_v1.2.jar</source><destination>$INSTALL_DIR</destination></action>
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8 <action type="download_by_url">https://github.com/GenomicsCoreLeuven/GBSX/releases/download/v1.2/GBSX_digest_v1.1.pl</action>
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9 <action type="move_file" rename_to="GBSX_digest.pl"><source>GBSX_digest_v1.1.pl</source><destination>$INSTALL_DIR</destination></action>
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10 <action type="set_environment">
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11 <environment_variable name="GBSX_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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12 </action>
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058ec87cebd6 Uploaded tool_dependencies.xml
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13 </actions>
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14 </install>
058ec87cebd6 Uploaded tool_dependencies.xml
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15 <readme>Installs the GBSX jar.</readme>
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16 </package>
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17 <package name="bioperl" version="1.6.922">
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18 <repository name="package_bioperl_1_6" changeset_revision="0:5ef71da82044" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu/" />
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19 </package>
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20 </tool_dependency>