comparison planemo_test.sh @ 6:ca7c9a6da2c6 draft

planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 83b80dcd96b379518c2e4ace992affc889d32ca6
author lecorguille
date Fri, 08 Apr 2016 10:40:12 -0400
parents
children ed8d80fc927c
comparison
equal deleted inserted replaced
5:df7b3b846cb6 6:ca7c9a6da2c6
1 planemo conda_init
2 planemo conda_install .
3 #Linking packages ...
4 #Error: ERROR: placeholder '/root/miniconda3/envs/_build_placehold_placehold_placehold_placehold_placehold_p' too short in: ncurses-5.9-4
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6
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8 source /w/galaxy/dev/shed_tools_tool_dependency_dir/R/3.1.2/iuc/package_r_3_1_2/1ca39eb16186/env.sh
9 source /w/galaxy/dev/shed_tools_tool_dependency_dir/bioconductor-camera/1.22.0/lecorguille/package_bioconductor_camera_1_22_0/22cec61d66c2/env.sh
10 planemo test --install_galaxy
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12 #All 1 test(s) executed passed.
13 #abims_xcms_summary[0]: passed
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16 planemo shed_test --install_galaxy --galaxy_branch "dev"
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18 #All 2 test(s) executed passed.
19 #testtoolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.8[0]: passed
20 #testtoolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.8[1]: passed
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