diff planemo_test.sh @ 6:ca7c9a6da2c6 draft

planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 83b80dcd96b379518c2e4ace992affc889d32ca6
author lecorguille
date Fri, 08 Apr 2016 10:40:12 -0400
parents
children ed8d80fc927c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/planemo_test.sh	Fri Apr 08 10:40:12 2016 -0400
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+planemo conda_init
+planemo conda_install .
+#Linking packages ...
+#Error: ERROR: placeholder '/root/miniconda3/envs/_build_placehold_placehold_placehold_placehold_placehold_p' too short in: ncurses-5.9-4
+
+
+
+source /w/galaxy/dev/shed_tools_tool_dependency_dir/R/3.1.2/iuc/package_r_3_1_2/1ca39eb16186/env.sh
+source /w/galaxy/dev/shed_tools_tool_dependency_dir/bioconductor-camera/1.22.0/lecorguille/package_bioconductor_camera_1_22_0/22cec61d66c2/env.sh
+planemo test --install_galaxy
+
+#All 1 test(s) executed passed.
+#abims_xcms_summary[0]: passed
+
+
+planemo shed_test --install_galaxy --galaxy_branch "dev" 
+
+#All 2 test(s) executed passed.
+#testtoolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.8[0]: passed
+#testtoolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.8[1]: passed
+