Mercurial > repos > lecorguille > xcms_summary
view planemo_test.sh @ 7:ed8d80fc927c draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 727b4a74b8e424af622dc0e2b0c910cdd020cd29
author | lecorguille |
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date | Mon, 25 Apr 2016 11:15:29 -0400 |
parents | ca7c9a6da2c6 |
children |
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# Example of planemo command to launch test # -- Use of installed package environments # after having installing package on a local galaxy instance source /w/galaxy/dev/shed_tools_tool_dependency_dir/R/3.1.2/iuc/package_r_3_1_2/1ca39eb16186/env.sh source /w/galaxy/dev/shed_tools_tool_dependency_dir/bioconductor-camera/1.22.0/lecorguille/package_bioconductor_camera_1_22_0/22cec61d66c2/env.sh planemo test --install_galaxy #All 1 test(s) executed passed. #abims_xcms_summary[0]: passed # -- Use of conda dependencies planemo conda_init --conda_prefix /tmp/mc planemo conda_install --conda_prefix /tmp/mc . planemo test --install_galaxy --conda_prefix /tmp/mc --conda_dependency_resolution #All 1 test(s) executed passed. #abims_xcms_summary[0]: passed # -- Use of shed_test planemo shed_test --install_galaxy #All 1 test(s) executed passed. #toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_summary/abims_xcms_summary/1.0.0[0]: passed