Mercurial > repos > leomrtns > nanostat
view test-data/out.txt @ 0:e86d1c122ee7 draft
initial upload
author | leomrtns |
---|---|
date | Tue, 14 May 2019 05:36:34 -0400 |
parents | |
children |
line wrap: on
line source
General summary: Mean read length: 144.9 Mean read quality: 27.8 Median read length: 151.0 Median read quality: 28.2 Number of reads: 18,250.0 Read length N50: 151.0 Total bases: 2,645,038.0 Number, percentage and megabases of reads above quality cutoffs >Q5: 18247 (100.0%) 2.6Mb >Q7: 18247 (100.0%) 2.6Mb >Q10: 18247 (100.0%) 2.6Mb >Q12: 18247 (100.0%) 2.6Mb >Q15: 18247 (100.0%) 2.6Mb Top 5 highest mean basecall quality scores and their read lengths 1: 35.8 (151) 2: 35.8 (151) 3: 35.8 (151) 4: 35.8 (151) 5: 35.8 (151) Top 5 longest reads and their mean basecall quality score 1: 151 (27.3) 2: 151 (32.2) 3: 151 (20.3) 4: 151 (32.5) 5: 151 (22.5)