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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="hmmer" version="3.1b1">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://selab.janelia.org/software/hmmer3/3.1b1/hmmer-3.1b1.tar.gz</action>
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7 <!-- Make -->
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8 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
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9 <action type="shell_command">make</action>
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10 <action type="shell_command">make install</action>
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11 <action type="set_environment">
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12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 This installs hmmer 3.1b1. See http://hmmer.janelia.org/ for more details.
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18 </readme>
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19 </package>
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20 </tool_dependency>
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21
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