comparison galaxy_stubs/EvenSplit.xml @ 2:605370bc1def draft default tip

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author luis
date Tue, 12 Jul 2016 12:33:33 -0400
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1:31013b5cd066 2:605370bc1def
1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <!--Proposed Tool Section: [Preparation]-->
4 <tool id="EvenSplit" name="EvenSplit" version="1.1.0">
5 <description>generate splits w/ equal property range</description>
6 <macros>
7 <token name="@EXECUTABLE@">EvenSplit</token>
8 <import>macros.xml</import>
9 </macros>
10 <expand macro="stdio"/>
11 <expand macro="requirements"/>
12 <command>EvenSplit
13
14 #if $param_i:
15 -i $param_i
16 #end if
17 #if $param_o1:
18 -o1 $param_o1
19 #end if
20 #if $param_o2:
21 -o2 $param_o2
22 #end if
23 #if $param_prop:
24 -prop "$param_prop"
25 #end if
26 #if $param_n:
27 -n $param_n
28 #end if
29 #if $param_k:
30 -k $param_k
31 #end if
32 #if $param_offset:
33 -offset $param_offset
34 #end if
35 </command>
36 <inputs>
37 <param name="param_i" type="data" format="mol2,sdf,drf" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="input file" help="(-i) "/>
38 <param name="param_prop" type="text" size="30" value="binding_free_energy" label="property name" help="(-prop) ">
39 <sanitizer>
40 <valid initial="string.printable">
41 <remove value="'"/>
42 <remove value="&quot;"/>
43 </valid>
44 </sanitizer>
45 </param>
46 <param name="param_n" type="integer" value="0" label="max. number of compounds to use from input file" help="(-n) "/>
47 <param name="param_k" type="integer" value="2" label="extract each k'th compound to 2nd output file" help="(-k) "/>
48 <param name="param_offset" type="integer" value="0" label="offset; extract each (i+offset)%k == 0 to 2nd output file" help="(-offset) "/>
49 </inputs>
50 <expand macro="advanced_options"/>
51 <outputs>
52 <data name="param_o1" metadata_source="param_i" format="input"/>
53 <data name="param_o2" metadata_source="param_i" format="input"/>
54 </outputs>
55 <help>This tool splits a molecule file into two subsets in such a way that each of them convers an equal range of a property. The property with respect to which this is to be done should be specified with '-prop'.
56
57 </help>
58 </tool>