Mercurial > repos > luis > ball
comparison galaxy_stubs/EvenSplit.xml @ 2:605370bc1def draft default tip
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author | luis |
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date | Tue, 12 Jul 2016 12:33:33 -0400 |
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1:31013b5cd066 | 2:605370bc1def |
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1 <?xml version='1.0' encoding='UTF-8'?> | |
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> | |
3 <!--Proposed Tool Section: [Preparation]--> | |
4 <tool id="EvenSplit" name="EvenSplit" version="1.1.0"> | |
5 <description>generate splits w/ equal property range</description> | |
6 <macros> | |
7 <token name="@EXECUTABLE@">EvenSplit</token> | |
8 <import>macros.xml</import> | |
9 </macros> | |
10 <expand macro="stdio"/> | |
11 <expand macro="requirements"/> | |
12 <command>EvenSplit | |
13 | |
14 #if $param_i: | |
15 -i $param_i | |
16 #end if | |
17 #if $param_o1: | |
18 -o1 $param_o1 | |
19 #end if | |
20 #if $param_o2: | |
21 -o2 $param_o2 | |
22 #end if | |
23 #if $param_prop: | |
24 -prop "$param_prop" | |
25 #end if | |
26 #if $param_n: | |
27 -n $param_n | |
28 #end if | |
29 #if $param_k: | |
30 -k $param_k | |
31 #end if | |
32 #if $param_offset: | |
33 -offset $param_offset | |
34 #end if | |
35 </command> | |
36 <inputs> | |
37 <param name="param_i" type="data" format="mol2,sdf,drf" optional="False" value="<class 'CTDopts.CTDopts._Null'>" label="input file" help="(-i) "/> | |
38 <param name="param_prop" type="text" size="30" value="binding_free_energy" label="property name" help="(-prop) "> | |
39 <sanitizer> | |
40 <valid initial="string.printable"> | |
41 <remove value="'"/> | |
42 <remove value="""/> | |
43 </valid> | |
44 </sanitizer> | |
45 </param> | |
46 <param name="param_n" type="integer" value="0" label="max. number of compounds to use from input file" help="(-n) "/> | |
47 <param name="param_k" type="integer" value="2" label="extract each k'th compound to 2nd output file" help="(-k) "/> | |
48 <param name="param_offset" type="integer" value="0" label="offset; extract each (i+offset)%k == 0 to 2nd output file" help="(-offset) "/> | |
49 </inputs> | |
50 <expand macro="advanced_options"/> | |
51 <outputs> | |
52 <data name="param_o1" metadata_source="param_i" format="input"/> | |
53 <data name="param_o2" metadata_source="param_i" format="input"/> | |
54 </outputs> | |
55 <help>This tool splits a molecule file into two subsets in such a way that each of them convers an equal range of a property. The property with respect to which this is to be done should be specified with '-prop'. | |
56 | |
57 </help> | |
58 </tool> |