Mercurial > repos > luis > ball
diff galaxy_stubs/EvenSplit.xml @ 2:605370bc1def draft default tip
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author | luis |
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date | Tue, 12 Jul 2016 12:33:33 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/galaxy_stubs/EvenSplit.xml Tue Jul 12 12:33:33 2016 -0400 @@ -0,0 +1,58 @@ +<?xml version='1.0' encoding='UTF-8'?> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--Proposed Tool Section: [Preparation]--> +<tool id="EvenSplit" name="EvenSplit" version="1.1.0"> + <description>generate splits w/ equal property range</description> + <macros> + <token name="@EXECUTABLE@">EvenSplit</token> + <import>macros.xml</import> + </macros> + <expand macro="stdio"/> + <expand macro="requirements"/> + <command>EvenSplit + +#if $param_i: + -i $param_i +#end if +#if $param_o1: + -o1 $param_o1 +#end if +#if $param_o2: + -o2 $param_o2 +#end if +#if $param_prop: + -prop "$param_prop" +#end if +#if $param_n: + -n $param_n +#end if +#if $param_k: + -k $param_k +#end if +#if $param_offset: + -offset $param_offset +#end if +</command> + <inputs> + <param name="param_i" type="data" format="mol2,sdf,drf" optional="False" value="<class 'CTDopts.CTDopts._Null'>" label="input file" help="(-i) "/> + <param name="param_prop" type="text" size="30" value="binding_free_energy" label="property name" help="(-prop) "> + <sanitizer> + <valid initial="string.printable"> + <remove value="'"/> + <remove value="""/> + </valid> + </sanitizer> + </param> + <param name="param_n" type="integer" value="0" label="max. number of compounds to use from input file" help="(-n) "/> + <param name="param_k" type="integer" value="2" label="extract each k'th compound to 2nd output file" help="(-k) "/> + <param name="param_offset" type="integer" value="0" label="offset; extract each (i+offset)%k == 0 to 2nd output file" help="(-offset) "/> + </inputs> + <expand macro="advanced_options"/> + <outputs> + <data name="param_o1" metadata_source="param_i" format="input"/> + <data name="param_o2" metadata_source="param_i" format="input"/> + </outputs> + <help>This tool splits a molecule file into two subsets in such a way that each of them convers an equal range of a property. The property with respect to which this is to be done should be specified with '-prop'. + +</help> +</tool>