view galaxy_stubs/EvenSplit.xml @ 2:605370bc1def draft default tip

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author luis
date Tue, 12 Jul 2016 12:33:33 -0400
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<?xml version='1.0' encoding='UTF-8'?>
<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
<!--Proposed Tool Section: [Preparation]-->
<tool id="EvenSplit" name="EvenSplit" version="1.1.0">
  <description>generate splits w/ equal property range</description>
  <macros>
    <token name="@EXECUTABLE@">EvenSplit</token>
    <import>macros.xml</import>
  </macros>
  <expand macro="stdio"/>
  <expand macro="requirements"/>
  <command>EvenSplit

#if $param_i:
  -i $param_i
#end if
#if $param_o1:
  -o1 $param_o1
#end if
#if $param_o2:
  -o2 $param_o2
#end if
#if $param_prop:
  -prop     "$param_prop"
#end if
#if $param_n:
  -n $param_n
#end if
#if $param_k:
  -k $param_k
#end if
#if $param_offset:
  -offset $param_offset
#end if
</command>
  <inputs>
    <param name="param_i" type="data" format="mol2,sdf,drf" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="input file" help="(-i) "/>
    <param name="param_prop" type="text" size="30" value="binding_free_energy" label="property name" help="(-prop) ">
      <sanitizer>
        <valid initial="string.printable">
          <remove value="'"/>
          <remove value="&quot;"/>
        </valid>
      </sanitizer>
    </param>
    <param name="param_n" type="integer" value="0" label="max. number of compounds to use from input file" help="(-n) "/>
    <param name="param_k" type="integer" value="2" label="extract each k'th compound to 2nd output file" help="(-k) "/>
    <param name="param_offset" type="integer" value="0" label="offset; extract each (i+offset)%k == 0 to 2nd output file" help="(-offset) "/>
  </inputs>
  <expand macro="advanced_options"/>
  <outputs>
    <data name="param_o1" metadata_source="param_i" format="input"/>
    <data name="param_o2" metadata_source="param_i" format="input"/>
  </outputs>
  <help>This tool splits a molecule file into two subsets in such a way that each of them convers an equal range of a property. The property with respect to which this is to be done should be specified with '-prop'.

</help>
</tool>