Mercurial > repos > mheinzl > fsd_regions

comparison test-data/output_file.tabular @ 6:26014c24323a draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 8833d1a8a49d7b6d4a9c849b0335d3260564b351-dirty
author mheinzl
date Fri, 26 Oct 2018 07:54:03 -0400
parents b202c97deabe
children
comparison
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5:52454637bc45 6:26014c24323a
3 max. family size: 85 332 3 max. family size: 85 332
4 absolute frequency: 9 1 4 absolute frequency: 9 1
5 relative frequency: 0.209 0.062 5 relative frequency: 0.209 0.062
6 6
7 total nr. of reads 1312 7 total nr. of reads 1312
8 total nr. of tags 32 (16)
8 9
9 10
10 Values from family size distribution 11 Values from family size distribution
11 87_636 656_1143 1141_1564 1892_2398 12 ACH_87_636 ACH_656_1143 ACH_1141_1564 ACH_1892_2398
12 FS=3 0 0 0 1 13 FS=3 0 0 0 1
13 FS=4 2 0 0 0 14 FS=4 2 0 0 0
14 FS=5 2 0 0 0 15 FS=5 2 0 0 0
15 FS=6 0 1 0 0 16 FS=6 0 1 0 0
16 FS=7 3 0 0 2 17 FS=7 3 0 0 2
30 FS>20 0 8 4 0 31 FS>20 0 8 4 0
31 sum 10 10 6 6 32 sum 10 10 6 6
32 33
33 34
34 In the plot, both family sizes of the ab and ba strands were used. 35 In the plot, both family sizes of the ab and ba strands were used.
35 Whereas the total numbers indicate only the single count of the tags per region. 36 Whereas the total numbers indicate only the count of the tags per region.
37
38
36 Region total nr. of tags per region 39 Region total nr. of tags per region
37 87_636 5 40 ACH_87_636 5
38 656_1143 5 41 ACH_656_1143 5
39 1141_1564 3 42 ACH_1141_1564 3
40 1892_2398 3 43 ACH_1892_2398 3
41 sum of tags 16