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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 8833d1a8a49d7b6d4a9c849b0335d3260564b351-dirty
author mheinzl
date Fri, 26 Oct 2018 07:54:03 -0400
parents b202c97deabe
children
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Dataset:	Test_data
	AB	BA
max. family size:	85	332
absolute frequency:	9	1
relative frequency:	0.209	0.062

total nr. of reads	1312
total nr. of tags	32 (16)


Values from family size distribution
	ACH_87_636	ACH_656_1143	ACH_1141_1564	ACH_1892_2398	
FS=3	0	0	0	1	
FS=4	2	0	0	0	
FS=5	2	0	0	0	
FS=6	0	1	0	0	
FS=7	3	0	0	2	
FS=8	0	0	0	1	
FS=9	1	0	0	2	
FS=10	2	0	0	0	
FS=11	0	1	1	0	
FS=12	0	0	0	0	
FS=13	0	0	0	0	
FS=14	0	0	0	0	
FS=15	0	0	1	0	
FS=16	0	0	0	0	
FS=17	0	0	0	0	
FS=18	0	0	0	0	
FS=19	0	0	0	0	
FS=20	0	0	0	0	
FS>20	0	8	4	0	
sum	10	10	6	6	


In the plot, both family sizes of the ab and ba strands were used.
Whereas the total numbers indicate only the count of the tags per region.


Region	total nr. of tags per region
ACH_87_636	5
ACH_656_1143	5
ACH_1141_1564	3
ACH_1892_2398	3