view test-data/output_file.tabular @ 4:b202c97deabe draft

planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
author mheinzl
date Mon, 08 Oct 2018 05:53:50 -0400
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children 26014c24323a
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Dataset:	Test_data
	AB	BA
max. family size:	85	332
absolute frequency:	9	1
relative frequency:	0.209	0.062

total nr. of reads	1312


Values from family size distribution
	87_636	656_1143	1141_1564	1892_2398	
FS=3	0	0	0	1	
FS=4	2	0	0	0	
FS=5	2	0	0	0	
FS=6	0	1	0	0	
FS=7	3	0	0	2	
FS=8	0	0	0	1	
FS=9	1	0	0	2	
FS=10	2	0	0	0	
FS=11	0	1	1	0	
FS=12	0	0	0	0	
FS=13	0	0	0	0	
FS=14	0	0	0	0	
FS=15	0	0	1	0	
FS=16	0	0	0	0	
FS=17	0	0	0	0	
FS=18	0	0	0	0	
FS=19	0	0	0	0	
FS=20	0	0	0	0	
FS>20	0	8	4	0	
sum	10	10	6	6	


In the plot, both family sizes of the ab and ba strands were used.
Whereas the total numbers indicate only the single count of the tags per region.
Region	total nr. of tags per region
87_636	5
656_1143	5
1141_1564	3
1892_2398	3
sum of tags	16