Mercurial > repos > mheinzl > fsd_regions
comparison test-data/output_file.tabular @ 4:b202c97deabe draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
| author | mheinzl |
|---|---|
| date | Mon, 08 Oct 2018 05:53:50 -0400 |
| parents | |
| children | 26014c24323a |
comparison
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| 3:85d870b8ae92 | 4:b202c97deabe |
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| 1 Dataset: Test_data | |
| 2 AB BA | |
| 3 max. family size: 85 332 | |
| 4 absolute frequency: 9 1 | |
| 5 relative frequency: 0.209 0.062 | |
| 6 | |
| 7 total nr. of reads 1312 | |
| 8 | |
| 9 | |
| 10 Values from family size distribution | |
| 11 87_636 656_1143 1141_1564 1892_2398 | |
| 12 FS=3 0 0 0 1 | |
| 13 FS=4 2 0 0 0 | |
| 14 FS=5 2 0 0 0 | |
| 15 FS=6 0 1 0 0 | |
| 16 FS=7 3 0 0 2 | |
| 17 FS=8 0 0 0 1 | |
| 18 FS=9 1 0 0 2 | |
| 19 FS=10 2 0 0 0 | |
| 20 FS=11 0 1 1 0 | |
| 21 FS=12 0 0 0 0 | |
| 22 FS=13 0 0 0 0 | |
| 23 FS=14 0 0 0 0 | |
| 24 FS=15 0 0 1 0 | |
| 25 FS=16 0 0 0 0 | |
| 26 FS=17 0 0 0 0 | |
| 27 FS=18 0 0 0 0 | |
| 28 FS=19 0 0 0 0 | |
| 29 FS=20 0 0 0 0 | |
| 30 FS>20 0 8 4 0 | |
| 31 sum 10 10 6 6 | |
| 32 | |
| 33 | |
| 34 In the plot, both family sizes of the ab and ba strands were used. | |
| 35 Whereas the total numbers indicate only the single count of the tags per region. | |
| 36 Region total nr. of tags per region | |
| 37 87_636 5 | |
| 38 656_1143 5 | |
| 39 1141_1564 3 | |
| 40 1892_2398 3 | |
| 41 sum of tags 16 |